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scnpilot_solids1_trim150_scaffold_5744

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_5744_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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203..1282
DNA (1080bp) protein (360aa)
transaldolase (EC:2.2.1.2); K00616 transaldolase [EC:2.2.1.2] id=12493997 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
transaldolase (EC:2.2.1.2); K00616 transaldolase [EC:2.2.1.2]
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids1_trim150_scaffold_5744_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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1431..2018
DNA (588bp) protein (196aa)
hypothetical protein id=12493998 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_5744_3
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(2105..2908)
DNA (804bp) protein (268aa)
Tax=GWF2_Verrucomicrobia_62_7_curated
scnpilot_solids1_trim150_scaffold_5744_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2931..3857
DNA (927bp) protein (309aa)
acetolactate synthase, large subunit (EC:2.2.1.6); K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] id=12493999 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
acetolactate synthase, large subunit (EC:2.2.1.6); K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids1_trim150_scaffold_5744_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3928..4482
DNA (555bp) protein (185aa)
GTP cyclohydrolase I id=12494000 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
GTP cyclohydrolase I
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids1_trim150_scaffold_5744_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4511..5248)
DNA (738bp) protein (246aa)
ribosomal large subunit pseudouridine synthase A (EC:5.4.99.-); K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] id=12494001 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
ribosomal large subunit pseudouridine synthase A (EC:5.4.99.-); K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids1_trim150_scaffold_5744_7

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5325..5957
DNA (633bp) protein (211aa)
hypothetical protein id=12494002 bin=THIO_HI species=Thiocystis violascens genus=Thiocystis taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
Uncharacterized protein {ECO:0000313|EMBL:KKK75824.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_5744_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5965..7443)
DNA (1479bp) protein (493aa)
leucyl aminopeptidase (EC:3.4.11.1); K01255 leucyl aminopeptidase [EC:3.4.11.1] rbh
peptidase M17 n=1 Tax=Thiobacillus thioparus RepID=UPI00036AEA2F rbh
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids1_trim150_scaffold_5744_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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7555..8427
DNA (873bp) protein (291aa)
dehydrogenase complex, E1 component subunit alpha; K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] id=12494005 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
dehydrogenase complex, E1 component subunit alpha; K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_solids1_trim150_scaffold_5744_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8485..9534
DNA (1050bp) protein (350aa)
pyruvate dehydrogenase E1 subunit beta; K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] id=12494006 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
pyruvate dehydrogenase E1 subunit beta; K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids1_trim150_scaffold_5744_11
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9709..9828
DNA (120bp) protein (40aa)
dihydrolipoamide dehydrogenase (EC:1.8.1.4); K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4]
Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase E3 component n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SL16_THIDA
Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase E3 component {ECO:0000313|EMBL:AAZ96605.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Displaying 11 items

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