ggKbase home page

scnpilot_solids1_trim150_scaffold_1015

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1015_1
unknown

Not on your lists

2..142
DNA (141bp) protein (47aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1015_2
unknown

Not on your lists

comp(151..402)
DNA (252bp) protein (84aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1015_3
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

485..1336
DNA (852bp) protein (284aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=U8C3F8_PSEAI
hypothetical protein
Plasmid replication/partition related protein {ECO:0000313|EMBL:BAH10001.1}; TaxID=303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (Arthrobacter siderocapsulatus).;"
scnpilot_solids1_trim150_scaffold_1015_4
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1340..1768
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Ochrobactrum intermedium M86 RepID=M5JTA2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ELT46864.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium M86.;"
scnpilot_solids1_trim150_scaffold_1015_5
unknown

Not on your lists

1948..2181
DNA (234bp) protein (78aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1015_6
unknown

Not on your lists

2267..2800
DNA (534bp) protein (178aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1015_7
Sphingobium sp. HDIP04, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2793..3170
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Sphingobium sp. HDIP04 RepID=T0G0W0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA97300.1}; TaxID=428994 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. HDIP04.;"
scnpilot_solids1_trim150_scaffold_1015_8
Sphingobium sp. HDIP04, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3170..3727
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Sphingobium sp. HDIP04 RepID=T0HD44_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA97299.1}; TaxID=428994 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. HDIP04.;"
scnpilot_solids1_trim150_scaffold_1015_9
Phaeobacter inhibens, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3724..5394
DNA (1671bp) protein (557aa)
Cytosine-specific DNA methylase domain-containing protein n=1 Tax=Phaeobacter inhibens (strain ATCC 700781 / DSM 17395 / CIP 105210 / NBRC 16654 / BS107) RepID=I7ENU1_PHAIB rbh
cytosine-specific DNA methylase domain-containing protein rbh
Cytosine-specific DNA methylase domain-containing protein {ECO:0000313|EMBL:AFO91943.1}; TaxID=391619 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Phaeobacter.;" source="Phaeobacter inhibens (strain ATCC 700781 / DSM 17395 / CIP 105210 /; NBRC 16654 / BS107).;"
scnpilot_solids1_trim150_scaffold_1015_10
unknown

Not on your lists

5391..5570
DNA (180bp) protein (60aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1015_11
unknown

Not on your lists

5563..5913
DNA (351bp) protein (117aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1015_12
unknown

Not on your lists

5910..6266
DNA (357bp) protein (119aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1015_13
unknown

Not on your lists

6266..6490
DNA (225bp) protein (75aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1015_14
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6483..7844
DNA (1362bp) protein (454aa)
Replicative DNA helicase n=1 Tax=Sphingomonas sp. LH128 RepID=J8VQY8_9SPHN rbh
Replicative DNA helicase {ECO:0000313|EMBL:EJU15152.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
replicative DNA helicase
scnpilot_solids1_trim150_scaffold_1015_15
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7841..8635
DNA (795bp) protein (265aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6E8S8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EHJ62152.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1015_16
unknown

Not on your lists

8632..8853
DNA (222bp) protein (74aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1015_17
Sphingobium sp. HDIP04, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8850..9587
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Sphingobium sp. HDIP04 RepID=T0G0V1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA97290.1}; TaxID=428994 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. HDIP04.;"
scnpilot_solids1_trim150_scaffold_1015_18
Sphingobium sp. HDIP04, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9709..10359
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Sphingobium sp. HDIP04 RepID=T0HD30_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA97289.1}; TaxID=428994 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. HDIP04.;"
scnpilot_solids1_trim150_scaffold_1015_19
Sphingobium sp. HDIP04, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10319..12448
DNA (2130bp) protein (710aa)
Uncharacterized protein n=1 Tax=Sphingobium sp. HDIP04 RepID=T0HIA4_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQA97288.1}; TaxID=428994 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. HDIP04.;"
bacteriophage terminase large subunit
scnpilot_solids1_trim150_scaffold_1015_20
unknown

Not on your lists

12472..12798
DNA (327bp) protein (109aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1015_21
unknown

Not on your lists

12800..13165
DNA (366bp) protein (122aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1015_22

Not on your lists

13186..14982
DNA (1797bp) protein (599aa)
Uncharacterized protein n=1 Tax=Sporothrix schenckii (strain ATCC 58251 / de Perez 2211183) RepID=U7PS25_SPOS1
Uncharacterized protein {ECO:0000313|EMBL:KKS81289.1}; TaxID=1619011 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWC1_43_10.;"
scnpilot_solids1_trim150_scaffold_1015_23
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15464..15988
DNA (525bp) protein (175aa)
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
scnpilot_solids1_trim150_scaffold_1015_24
Sphingobium sp. HDIP04, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15990..17642
DNA (1653bp) protein (551aa)
Uncharacterized protein n=1 Tax=Sphingobium sp. HDIP04 RepID=T0GB94_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQA97287.1}; TaxID=428994 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. HDIP04.;"
phage portal protein, lambda family
scnpilot_solids1_trim150_scaffold_1015_25
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17639..18580
DNA (942bp) protein (314aa)
serine protease ClpP n=1 Tax=Marinobacterium stanieri RepID=UPI000255A5F4
periplasmic serine protease (ClpP class)
Periplasmic serine protease (ClpP class) {ECO:0000313|EMBL:ABC29670.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hahella chejuensis (strain KCTC 2396).;"
scnpilot_solids1_trim150_scaffold_1015_26
unknown

Not on your lists

18577..19131
DNA (555bp) protein (185aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1015_27
Pararhodospirillum photometricum, Pararhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19157..19534
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Rhodospirillum photometricum DSM 122 RepID=H6SMH3_RHOPH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG09108.1}; TaxID=1150469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Pararhodospirillum.;" source="Rhodospirillum photometricum DSM 122.;"
scnpilot_solids1_trim150_scaffold_1015_28
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19615..20640
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A593_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EHL97711.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
putative phage protein GP20
scnpilot_solids1_trim150_scaffold_1015_29
unknown

Not on your lists

20698..20976
DNA (279bp) protein (93aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1015_30
unknown

Not on your lists

20976..21320
DNA (345bp) protein (115aa)

This feature has no annotations

Displaying items 1-30 of 39 in total

View Taxonomy