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scnpilot_solids1_trim150_scaffold_1023

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1023_1
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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51..1298
DNA (1248bp) protein (416aa)
Outer membrane protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QKS5_AZOSU
Cation transporter {ECO:0000313|EMBL:EVT87816.1}; TaxID=1441931 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA09.;"
outer membrane protein; K15725 cobalt-zinc-cadmium resistance protein CzcC
scnpilot_solids1_trim150_scaffold_1023_2
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1295..2527
DNA (1233bp) protein (411aa)
Cation transporter n=1 Tax=Pseudomonas aeruginosa DHS01 RepID=V4XHR6_PSEAI
Cation transporter {ECO:0000313|EMBL:KGM56154.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
acetyl/propionyl-CoA carboxylase, alpha subunit; K15727 cobalt-zinc-cadmium resistance protein CzcB
scnpilot_solids1_trim150_scaffold_1023_3
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2951..3916
DNA (966bp) protein (322aa)
CzcA family heavy metal efflux pump n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7V7B3_STEMA
CzcA family heavy metal efflux pump {ECO:0000313|EMBL:EJP78451.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
smmL; putative AcrA/AcrD/AcrF family protein; K15726 cobalt-zinc-cadmium resistance protein CzcA
scnpilot_solids1_trim150_scaffold_1023_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3898..5616
DNA (1719bp) protein (573aa)
Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KI61_STEMA
cusA; Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA; K15726 cobalt-zinc-cadmium resistance protein CzcA
Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA {ECO:0000313|EMBL:CCH10750.1}; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;"
scnpilot_solids1_trim150_scaffold_1023_5
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5665..6723
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TU75_ALIDB rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADV00480.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scnpilot_solids1_trim150_scaffold_1023_6
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6743..8191)
DNA (1449bp) protein (483aa)
Chromate transporter, chromate ion transporter (CHR) family n=2 Tax=Burkholderia vietnamiensis (strain G4 / LMG 22486) RepID=A4JRX3_BURVG rbh
Chromate transporter {ECO:0000313|EMBL:AIU25470.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
chromate transporter rbh
scnpilot_solids1_trim150_scaffold_1023_7
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8195..8833)
DNA (639bp) protein (213aa)
manganese and iron superoxide dismutase; K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
Manganese and iron superoxide dismutase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9R4_9GAMM rbh
Manganese and iron superoxide dismutase {ECO:0000313|EMBL:EIL96205.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
scnpilot_solids1_trim150_scaffold_1023_8
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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comp(8852..10996)
DNA (2145bp) protein (715aa)
Putative uncharacterized protein id=8267180 bin=CD_OP8_4m species=unknown genus=Maribacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes) rbh
hypothetical protein rbh
Tax=RBG_13_Acidobacteria_68_16_curated
scnpilot_solids1_trim150_scaffold_1023_9
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11021..11947)
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5LA16_STEMA rbh
Uncharacterized protein {ECO:0000313|EMBL:EQM88076.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
protein of unknown function (DUF1259) rbh
scnpilot_solids1_trim150_scaffold_1023_10

Not on your lists

comp(11944..12915)
DNA (972bp) protein (324aa)
Chromate resistance signal peptide protein n=2 Tax=mine drainage metagenome RepID=T0Z043_9ZZZZ rbh
Chromate resistance signal peptide protein {ECO:0000313|EMBL:EQD38633.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1023_11
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12952..14184
DNA (1233bp) protein (411aa)
Arabinose efflux permease family protein n=1 Tax=Rhizobium sp. CF122 RepID=J2IPG1_9RHIZ rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:CDX17791.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
lrg6; Quinolone resistance protein norA rbh
scnpilot_solids1_trim150_scaffold_1023_12
unknown

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comp(14236..14565)
DNA (330bp) protein (110aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1023_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14736..15764
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIF7_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL99248.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1023_14
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16044..19100
DNA (3057bp) protein (1019aa)
Putative transposase n=1 Tax=Herbaspirillum huttiense subsp. huttiense RepID=Q9ALU6_9BURK rbh
Transposase {ECO:0000313|EMBL:KGM55928.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
transposase Tn3 family protein rbh
scnpilot_solids1_trim150_scaffold_1023_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19636..20091)
DNA (456bp) protein (152aa)
MerR family transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=I4WMZ0_9GAMM
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AGG90849.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1023_16
unknown

Not on your lists

comp(20088..20330)
DNA (243bp) protein (81aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1023_17
Pseudomonas mosselii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20649..21236)
DNA (588bp) protein (196aa)
hcnC; hydrogen cyanide synthase HcnC; K10816 hydrogen cyanide synthase HcnC [EC:1.4.99.5]
Hydrogen cyanide synthase HcnC n=1 Tax=Pseudomonas mosselii SJ10 RepID=V6V2W4_9PSED
Hydrogen cyanide synthase {ECO:0000313|EMBL:AIN61036.1}; TaxID=1388763 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mosselii SJ10.;"
Displaying 17 items

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