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scnpilot_solids1_trim150_scaffold_1085

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1085_1
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

97..1659
DNA (1563bp) protein (521aa)
Amidase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MX51_CORCM
gatA2; amidase
Amidase {ECO:0000313|EMBL:AFE08880.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
scnpilot_solids1_trim150_scaffold_1085_2
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1893..2630
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI000370ED3E
Class V aminotransferase {ECO:0000313|EMBL:CCH16578.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
cefD; class V aminotransferase
scnpilot_solids1_trim150_scaffold_1085_3
Caldalkalibacillus thermarum, Caldalkalibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2645..3325)
DNA (681bp) protein (227aa)
Transcriptional regulator, GntR family n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L6B7_9BACI
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EGL83117.1}; TaxID=986075 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Caldalkalibacillus.;" source="Caldalkalibacillus thermarum TA2.A1.;"
GntR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_1085_4
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

3604..5220
DNA (1617bp) protein (539aa)
Extracellular solute-binding protein family 5 n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NQN6_ROSCS rbh
extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein rbh
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ABU59882.1}; Flags: Precursor;; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
scnpilot_solids1_trim150_scaffold_1085_5
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

5311..6231
DNA (921bp) protein (307aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NQN7_ROSCS rbh
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABU59883.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
scnpilot_solids1_trim150_scaffold_1085_6
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

6228..7091
DNA (864bp) protein (288aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NQN8_ROSCS rbh
binding-protein-dependent transport system inner membrane protein; K02034 peptide/nickel transport system permease protein rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABU59884.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
scnpilot_solids1_trim150_scaffold_1085_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

7122..8192
DNA (1071bp) protein (357aa)
Beta-lactamase domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FB90_CONWI
beta-lactamase
Beta-lactamase domain protein {ECO:0000313|EMBL:ADB53282.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids1_trim150_scaffold_1085_8
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8232..9062
DNA (831bp) protein (277aa)
fabG; 3-ketoacyl-ACP reductase (EC:1.1.1.100); K00540 [EC:1.-.-.-]
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) n=1 Tax=Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) RepID=Q8RDG3_THETN
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AHM59004.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
scnpilot_solids1_trim150_scaffold_1085_9
unknown

Not on your lists

9062..9328
DNA (267bp) protein (89aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1085_10
Paenibacillus curdlanolyticus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9488..10264
DNA (777bp) protein (259aa)
2-deoxy-D-gluconate 3-dehydrogenase; K00065 2-deoxy-D-gluconate 3-dehydrogenase [EC:1.1.1.125]
2-deoxy-D-gluconate 3-dehydrogenase n=1 Tax=Paenibacillus curdlanolyticus YK9 RepID=E0IAS0_9BACL
2-deoxy-D-gluconate 3-dehydrogenase {ECO:0000313|EMBL:EFM10474.1}; TaxID=717606 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus curdlanolyticus YK9.;"
scnpilot_solids1_trim150_scaffold_1085_11
Rubellimicrobium thermophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10261..11046
DNA (786bp) protein (262aa)
Acetoacetate decarboxylase {ECO:0000313|EMBL:EPX84581.1}; EC=4.1.1.4 {ECO:0000313|EMBL:EPX84581.1};; TaxID=1123069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium thermophilum DSM 16684.;"
putative Acetoacetate decarboxylase (EC:4.1.1.4)
Acetoacetate decarboxylase n=1 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9QTC3_9RHOB
scnpilot_solids1_trim150_scaffold_1085_12
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11082..11888)
DNA (807bp) protein (269aa)
3-oxoacyl-[acyl-carrier protein] reductase (EC:1.1.1.100)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037327B2
Short-chain dehydrogenase {ECO:0000313|EMBL:AIR54009.1}; Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EFV85491.1}; TaxID=562971 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans C54.;"
scnpilot_solids1_trim150_scaffold_1085_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11885..12991)
DNA (1107bp) protein (369aa)
L-rhamnonate dehydratase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N8V0_9EURY
L-rhamnonate dehydratase {ECO:0000313|EMBL:EMA54316.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
mandelate racemase/muconate lactonizing protein
scnpilot_solids1_trim150_scaffold_1085_14
Lentisphaera araneosa, Lentisphaera, Lentisphaerales, Lentisphaeria, Lentisphaerae, Bacteria

Not on your lists

13208..14581
DNA (1374bp) protein (458aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003792532 rbh
Glutamate-1-semialdehyde-2,1-aminomutase {ECO:0000313|EMBL:EDM27992.1}; TaxID=313628 species="Bacteria; Lentisphaerae; Lentisphaeria; Lentisphaerales; Lentisphaeraceae; Lentisphaera.;" source="Lentisphaera araneosa HTCC2155.;"
class III aminotransferase
scnpilot_solids1_trim150_scaffold_1085_15
Lentisphaera araneosa, Lentisphaera, Lentisphaerales, Lentisphaeria, Lentisphaerae, Bacteria

Not on your lists

14607..15785
DNA (1179bp) protein (393aa)
mandelate racemase/muconate lactonizing protein; K01684 galactonate dehydratase [EC:4.2.1.6]
2-oxo-3-deoxygalactonate 6-phosphate aldolase n=1 Tax=Zavarzinella formosa RepID=UPI0002D6F4B1 rbh
2-oxo-3-deoxygalactonate 6-phosphate aldolase and galactonate dehydratase {ECO:0000313|EMBL:EDM27991.1}; TaxID=313628 species="Bacteria; Lentisphaerae; Lentisphaeria; Lentisphaerales; Lentisphaeraceae; Lentisphaera.;" source="Lentisphaera araneosa HTCC2155.;"
scnpilot_solids1_trim150_scaffold_1085_16
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

15798..17228
DNA (1431bp) protein (477aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VT84_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT96448.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids1_trim150_scaffold_1085_17
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

17247..18056
DNA (810bp) protein (270aa)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase (EC:4.1.1.68) rbh
Ureidoglycolate lyase n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1ILZ6_9BACT rbh
5-carboxymethyl-2-hydroxymuconate isomerase {ECO:0000313|EMBL:AHF92761.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
scnpilot_solids1_trim150_scaffold_1085_18
Deinococcus swuensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

18331..18780
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Deinococcus sp. 2009 RepID=UPI0003B6BF0A
Uncharacterized protein {ECO:0000313|EMBL:AIZ45329.1}; TaxID=1182571 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus swuensis.;"
hypothetical protein
Displaying 18 items

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