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scnpilot_solids1_trim150_scaffold_1092

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1092_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..1925
DNA (1923bp) protein (641aa)
Transposase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIE2_9GAMM
Transposase {ECO:0000313|EMBL:EIL99233.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
transposase
scnpilot_solids1_trim150_scaffold_1092_2
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2119..3900
DNA (1782bp) protein (594aa)
TonB-dependent receptor n=1 Tax=mine drainage metagenome RepID=T1B0V5_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:AHX16286.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
outer membrane receptor protein
scnpilot_solids1_trim150_scaffold_1092_3

Not on your lists

4070..7357
DNA (3288bp) protein (1096aa)
Glycosyl hydrolase BNR repeat-containing protein n=2 Tax=mine drainage metagenome RepID=T1C3I3_9ZZZZ
Glycosyl hydrolase BNR repeat-containing protein {ECO:0000313|EMBL:EQD75448.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
BNR/Asp-box repeat protein
scnpilot_solids1_trim150_scaffold_1092_4
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7682..10861
DNA (3180bp) protein (1060aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034BDE25 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAN44957.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1092_5
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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10900..12585
DNA (1686bp) protein (562aa)
Putative uncharacterized protein n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RIL3_DESPD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADW16422.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3).;"
scnpilot_solids1_trim150_scaffold_1092_6
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12819..13352
DNA (534bp) protein (178aa)
Putative reductase protein n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3MEZ2_RHISN
Deaminase/reductase {ECO:0000313|EMBL:AHX13534.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
putative reductase protein
scnpilot_solids1_trim150_scaffold_1092_7
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13405..14250)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VUJ8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90889.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein; K13472 sulfotransferase
scnpilot_solids1_trim150_scaffold_1092_8
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14333..15361)
DNA (1029bp) protein (343aa)
LacI family transcriptional regulator n=1 Tax=Dyella japonica RepID=UPI0002FB9F5F rbh
LacI family transcriptional regulator {ECO:0000313|EMBL:AIF45950.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator rbh
scnpilot_solids1_trim150_scaffold_1092_9
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15365..16417)
DNA (1053bp) protein (351aa)
bga4; beta-mannosidase; K15855 exo-1,4-beta-D-glucosaminidase [EC:3.2.1.165]
glycoside hydrolase n=1 Tax=Dyella japonica RepID=UPI000367FB1B
Glycoside hydrolase {ECO:0000313|EMBL:EIL90887.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
scnpilot_solids1_trim150_scaffold_1092_10
unknown

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16584..18098
DNA (1515bp) protein (505aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1092_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18037..19479)
DNA (1443bp) protein (481aa)
Amino acid permease-associated region n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU31_9GAMM
Amino acid permease-associated region {ECO:0000313|EMBL:EIL90722.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
amino acid permease-associated region rbh
scnpilot_solids1_trim150_scaffold_1092_12
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19631..22840)
DNA (3210bp) protein (1070aa)
TonB-dependent receptor n=1 Tax=Rhodanobacter sp. 115 RepID=I4VUJ5_9GAMM
TonB-dependent receptor {ECO:0000313|EMBL:EIL90886.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
TonB-dependent receptor
scnpilot_solids1_trim150_scaffold_1092_13
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23081..24145)
DNA (1065bp) protein (355aa)
Glucokinase {ECO:0000313|EMBL:EIL90885.1}; EC=2.7.1.2 {ECO:0000313|EMBL:EIL90885.1};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
glucokinase (EC:2.7.1.2); K00845 glucokinase [EC:2.7.1.2]
Glucokinase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VUJ4_9GAMM
scnpilot_solids1_trim150_scaffold_1092_14
Gordonia hirsuta, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24425..24643)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Gordonia hirsuta DSM 44140 = NBRC 16056 RepID=L7LBZ2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:GAC57582.1}; TaxID=1121927 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia hirsuta DSM 44140 = NBRC 16056.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1092_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24643..26292)
DNA (1650bp) protein (550aa)
Phosphoglucomutase {ECO:0000313|EMBL:EIL90873.1}; EC=5.4.2.2 {ECO:0000313|EMBL:EIL90873.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Phosphoglucomutase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUI2_9GAMM
phosphoglucomutase, alpha-D-glucose phosphate-specific
scnpilot_solids1_trim150_scaffold_1092_16
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(26292..27848)
DNA (1557bp) protein (519aa)
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9); K01810 glucose-6-phosphate isomerase [EC:5.3.1.9]
glucose-6-phosphate isomerase n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037F6897
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying 16 items

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