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scnpilot_solids1_trim150_scaffold_1102

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1102_1
bacterium YEK0313, Bacteria

Not on your lists

comp(796..1188)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003771331
Putative L,D-transpeptidase ErfK/SrfK {ECO:0000313|EMBL:CEJ15006.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
ErfK/YbiS/YcfS/YnhG family protein
scnpilot_solids1_trim150_scaffold_1102_2
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1209..1850)
DNA (642bp) protein (214aa)
DSBA oxidoreductase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A882_STAND
DSBA oxidoreductase
DSBA oxidoreductase {ECO:0000313|EMBL:ADH88555.1}; Flags: Precursor;; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
scnpilot_solids1_trim150_scaffold_1102_3
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2091..2753
DNA (663bp) protein (221aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IE82_XANP2 rbh
two component transcriptional regulator rbh
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABS66325.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
scnpilot_solids1_trim150_scaffold_1102_4
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2750..4108
DNA (1359bp) protein (453aa)
integral membrane sensor signal transduction histidine kinase; K07645 two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] rbh
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IE83_XANP2 rbh
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:ABS66326.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
scnpilot_solids1_trim150_scaffold_1102_5
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4286..4726)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BEU9_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK58645.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
scnpilot_solids1_trim150_scaffold_1102_6
unknown

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comp(4768..4938)
DNA (171bp) protein (57aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1102_7
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4950..5942)
DNA (993bp) protein (331aa)
Cbb3-type cytochrome oxidase, cytochrome c subunit n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BDS4_9RHIZ
Cbb3-type cytochrome oxidase, cytochrome c subunit
Cbb3-type cytochrome oxidase, cytochrome c subunit {ECO:0000313|EMBL:AGK58646.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
scnpilot_solids1_trim150_scaffold_1102_8
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5942..7351)
DNA (1410bp) protein (470aa)
Cbb3-type cytochrome oxidase subunit 1 n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B8Q1_9RHIZ
Cbb3-type cytochrome oxidase subunit 1
Cbb3-type cytochrome oxidase subunit 1 {ECO:0000313|EMBL:AGK58647.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
scnpilot_solids1_trim150_scaffold_1102_9
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7552..7878)
DNA (327bp) protein (109aa)
Pseudoazurin n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11GK5_MESSB
pseudoazurin
Pseudoazurin {ECO:0000313|EMBL:ABG63470.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids1_trim150_scaffold_1102_10
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8253..10319)
DNA (2067bp) protein (689aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3X3_9BRAD rbh
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:EFI52653.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
putative methyl-accepting chemotaxis protein rbh
scnpilot_solids1_trim150_scaffold_1102_11
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10430..11599)
DNA (1170bp) protein (390aa)
Extracellular ligand-binding receptor n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3X2_9BRAD rbh
Leu/Ile/Val/Thr-binding protein {ECO:0000313|EMBL:CEG06758.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
extracellular ligand-binding receptor protein rbh
scnpilot_solids1_trim150_scaffold_1102_12
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11967..12590
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NX52_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS30753.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
LemA family protein; K03744 LemA protein rbh
scnpilot_solids1_trim150_scaffold_1102_13
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12615..13475
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NQR8_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS30754.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein; K06872 uncharacterized protein rbh
scnpilot_solids1_trim150_scaffold_1102_14
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13487..13990
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NTK9_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS30755.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1102_15
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14105..14728
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3W8_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CEG06763.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_1102_16
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14809..15195
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NKD5_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS30757.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1102_17
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15279..16496)
DNA (1218bp) protein (406aa)
Hydroxypyruvate reductase {ECO:0000313|EMBL:EFI52646.1}; EC=1.1.1.81 {ECO:0000313|EMBL:EFI52646.1};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
ttuD; putative hydroxypyruvate reductase TtuD; K00050 hydroxypyruvate reductase [EC:1.1.1.81] rbh
Hydroxypyruvate reductase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3W6_9BRAD rbh
scnpilot_solids1_trim150_scaffold_1102_18
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16721..17908
DNA (1188bp) protein (396aa)
fadA1; 3-ketoacyl-CoA thiolase (EC:2.3.1.16); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] rbh
Acetyl-CoA acetyltransferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3W5_9BRAD rbh
3-ketoacyl-CoA thiolase {ECO:0000313|EMBL:CEG06766.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
scnpilot_solids1_trim150_scaffold_1102_19
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17918..19420
DNA (1503bp) protein (501aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
glpK; glycerol kinase (EC:2.7.1.30); K00864 glycerol kinase [EC:2.7.1.30] rbh
Glycerol kinase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3W4_9BRAD rbh
scnpilot_solids1_trim150_scaffold_1102_20
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19480..20064)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3W3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG06768.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1102_21
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20420..23185)
DNA (2766bp) protein (922aa)
metH; methionine synthase MetH (EC:2.1.1.13); K00548 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] rbh
Methionine synthase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3W2_9BRAD rbh
Methionine synthase {ECO:0000313|EMBL:EFI52642.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
Displaying 21 items

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