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scnpilot_solids1_trim150_scaffold_1111

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1111_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15..554)
DNA (540bp) protein (180aa)
aldehyde-activating protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035FC768 rbh
putative formaldehyde-activating enzyme
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_1111_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(894..2099)
DNA (1206bp) protein (402aa)
SCO1/SenC family protein/methylamine utilization protein MauG id=12498378 bin=THIO_MID species=Methylomicrobium alcaliphilum genus=Methylomicrobium taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
SCO1/SenC family protein/methylamine utilization protein MauG
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_1111_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2096..2851)
DNA (756bp) protein (252aa)
SCO1/SenC family protein/methylamine utilization protein MauG id=12498377 bin=THIO_MID species=Methylobacter marinus genus=Methylobacter taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
SCO1/SenC family protein/methylamine utilization protein MauG
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_1111_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2856..4250)
DNA (1395bp) protein (465aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003704DED rbh
selenium-binding protein rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_1111_5
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5286..6485
DNA (1200bp) protein (400aa)
methanesulfonate monooxygenase n=1 Tax=Thiobacillus thioparus RepID=UPI00037B17B1 rbh
Methanesulfonate monooxygenase, hydroxylase alpha subunit {ECO:0000313|EMBL:EGK72029.1}; TaxID=1000565 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methyloversatilis universalis (strain ATCC BAA-1314 / JCM 13912 /; FAM5).;"
msmS2; methanesulfonate monooxygenase, hydroxylase alpha (large) subunit rbh
scnpilot_solids1_trim150_scaffold_1111_6
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6620..7030
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036F59DE
Methanesulfonate monooxygenase, hydroxylase subunit beta {ECO:0000313|EMBL:EIZ03286.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
msmB; methanesulfonate monooxygenase, hydroxylase subunit beta
scnpilot_solids1_trim150_scaffold_1111_7
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7055..8092
DNA (1038bp) protein (346aa)
Ferredoxin--NAD(P)(+) reductase CarAd {ECO:0000313|EMBL:EWS61188.1}; EC=1.18.1.2 {ECO:0000313|EMBL:EWS61188.1};; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003680498 rbh
msmD; methanesulfonate monooxygenase component; reductase rbh
scnpilot_solids1_trim150_scaffold_1111_8
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8102..8830
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000364E0CA rbh
msmC; methanesulfonate monooxygenase component; iron sulfur protein rbh
Toluene-4-monooxygenase system protein C {ECO:0000313|EMBL:EWS56551.1}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
scnpilot_solids1_trim150_scaffold_1111_9
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8967..10121
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035C41EA rbh
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic component-like protein {ECO:0000313|EMBL:EGK72025.1}; TaxID=1000565 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methyloversatilis universalis (strain ATCC BAA-1314 / JCM 13912 /; FAM5).;"
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic component-like protein rbh
scnpilot_solids1_trim150_scaffold_1111_10
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10274..11596
DNA (1323bp) protein (441aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036CEA9E rbh
Bicarbonate transport system permease protein CmpB {ECO:0000313|EMBL:EWS56549.1}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
ABC transporter permease rbh
scnpilot_solids1_trim150_scaffold_1111_11
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11596..12477
DNA (882bp) protein (294aa)
Abc transporter atp-binding protein {ECO:0000313|EMBL:EIZ03291.1}; EC=3.6.1.3 {ECO:0000313|EMBL:EIZ03291.1};; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
ABC transporter n=1 Tax=Thiobacillus thioparus RepID=UPI00038209C2 rbh
ABC transporter ATP-binding protein; K02049 NitT/TauT family transport system ATP-binding protein rbh
scnpilot_solids1_trim150_scaffold_1111_12
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12483..13304
DNA (822bp) protein (274aa)
nitrate ABC transporter permease id=12495149 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
Putative Nitrate ABC transporter {ECO:0000313|EMBL:EGK72022.1}; TaxID=1000565 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methyloversatilis universalis (strain ATCC BAA-1314 / JCM 13912 /; FAM5).;"
nitrate ABC transporter permease rbh
scnpilot_solids1_trim150_scaffold_1111_13
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13316..14230
DNA (915bp) protein (305aa)
Bicarbonate transport ATP-binding protein CmpD {ECO:0000313|EMBL:EWS56546.1}; EC=3.6.3.- {ECO:0000313|EMBL:EWS56546.1};; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component-like protein; K02049 NitT/TauT family transport system ATP-binding protein id=12495150 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component-like protein; K02049 NitT/TauT family transport system ATP-binding protein rbh
scnpilot_solids1_trim150_scaffold_1111_14
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14281..15135
DNA (855bp) protein (285aa)
hypothetical protein; K07045 id=12495151 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
Putative metal-dependent hydrolase of the TIM-barrel fold protein {ECO:0000313|EMBL:EWS56545.1}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
hypothetical protein; K07045 rbh
scnpilot_solids1_trim150_scaffold_1111_15
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15426..16349
DNA (924bp) protein (308aa)
hypothetical protein; K07090 id=12495152 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
Uncharacterized protein {ECO:0000313|EMBL:EIZ03282.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
hypothetical protein; K07090 rbh
scnpilot_solids1_trim150_scaffold_1111_16
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16570..17106
DNA (537bp) protein (179aa)
nuoE; NADH dehydrogenase I chain E; K00127 formate dehydrogenase, gamma subunit id=12495153 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
nuoE; NADH dehydrogenase I chain E; K00127 formate dehydrogenase, gamma subunit
NADH dehydrogenase I chain E {ECO:0000313|EMBL:BAI73546.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
scnpilot_solids1_trim150_scaffold_1111_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17108..17323
DNA (216bp) protein (72aa)
fdsB; NAD-dependent formate dehydrogenase subunit beta (EC:1.2.1.2); K00124 formate dehydrogenase, beta subunit id=12495154 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
fdsB; formate dehydrogenase, beta subunit protein (EC:1.2.1.2); K00124 formate dehydrogenase, beta subunit
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Displaying 17 items

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