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scnpilot_solids1_trim150_scaffold_1123

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1123_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..541
DNA (540bp) protein (180aa)
DSBA oxidoreductase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VYV8_9SPHN rbh
DSBA oxidoreductase {ECO:0000313|EMBL:ENY80442.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
DSBA oxidoreductase
scnpilot_solids1_trim150_scaffold_1123_2
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1218..2240)
DNA (1023bp) protein (341aa)
Ribokinase-like domain-containing protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S5R0_9SPHN
PfkB {ECO:0000313|EMBL:KGB58131.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
ribokinase-like domain-containing protein
scnpilot_solids1_trim150_scaffold_1123_3
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2237..3025)
DNA (789bp) protein (263aa)
2-keto-4-pentenoate hydratase-like protein; K02554 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
2-keto-4-pentenoate hydratase n=1 Tax=Sphingomonas elodea RepID=UPI00026301D3
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
scnpilot_solids1_trim150_scaffold_1123_4
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3045..3791)
DNA (747bp) protein (249aa)
GntR family transcriptional regulator n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000378ACA1 rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:KGB56265.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
GntR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_1123_5
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3874..4740)
DNA (867bp) protein (289aa)
Esterase/lipase n=1 Tax=Caulobacter sp. AP07 RepID=J2PZN6_9CAUL
Esterase/lipase {ECO:0000313|EMBL:AJA07768.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1123_6
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4778..7636)
DNA (2859bp) protein (953aa)
Putative TonB dependent receptor protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VUA6_9SPHN rbh
putative TonB dependent receptor protein rbh
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
scnpilot_solids1_trim150_scaffold_1123_7
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7763..8602)
DNA (840bp) protein (280aa)
Acetylalginate esterase n=1 Tax=Sphingomonas sp. MJ-3 RepID=K9M8Q8_9SPHN rbh
G-D-S-L family lipolytic protein {ECO:0000313|EMBL:KGB56263.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
GDSL family lipase
scnpilot_solids1_trim150_scaffold_1123_8
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8634..9386)
DNA (753bp) protein (251aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Sphingomonas sp. LH128 RepID=J8VSJ5_9SPHN rbh
short-chain dehydrogenase/reductase SDR rbh
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
scnpilot_solids1_trim150_scaffold_1123_9
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9400..10674)
DNA (1275bp) protein (425aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000380FA7B rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:KGB58124.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
major facilitator superfamily protein; K08191 MFS transporter, ACS family, hexuronate transporter rbh
scnpilot_solids1_trim150_scaffold_1123_10
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10671..12845)
DNA (2175bp) protein (725aa)
Alginate lyase n=1 Tax=Sphingomonas sp. LH128 RepID=J8SIB5_9SPHN rbh
Alginate lyase {ECO:0000313|EMBL:KGB56260.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
alginate lyase rbh
scnpilot_solids1_trim150_scaffold_1123_11
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12842..15055)
DNA (2214bp) protein (738aa)
Poly(Beta-D-mannuronate) lyase {ECO:0000313|EMBL:AJA07762.1}; EC=4.2.2.3 {ECO:0000313|EMBL:AJA07762.1};; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
Poly(beta-D-mannuronate) lyase (EC:4.2.2.3); K01729 poly(beta-D-mannuronate) lyase [EC:4.2.2.3] rbh
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000371C506 rbh
scnpilot_solids1_trim150_scaffold_1123_12
Erythrobacter longus, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15100..18135)
DNA (3036bp) protein (1012aa)
TonB-dependent receptor n=2 Tax=Glaciecola RepID=K6WUQ3_9ALTE rbh
TonB-dependent receptor {ECO:0000313|EMBL:KEO88974.1}; TaxID=1044 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter longus.;"
TonB-dependent receptor rbh
scnpilot_solids1_trim150_scaffold_1123_trna_1
unknown

Not on your lists

comp(18621..18694)
DNA (74bp)
transferRNA Arg
Displaying 13 items

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