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scnpilot_solids1_trim150_scaffold_1146

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1146_1
Acinetobacter sp. CIP 102143, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

597..1667
DNA (1071bp) protein (357aa)
Uncharacterized protein n=2 Tax=Acinetobacter RepID=N8VV18_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ENX64984.1}; TaxID=1144666 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. CIP 102143.;"
scnpilot_solids1_trim150_scaffold_1146_2
Congregibacter litoralis, Congregibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1748..2881)
DNA (1134bp) protein (378aa)
Adenine-specific DNA methylase n=1 Tax=Congregibacter litoralis KT71 RepID=A4ABC6_9GAMM rbh
Adenine-specific DNA methylase {ECO:0000313|EMBL:EAQ96680.2}; TaxID=314285 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Congregibacter.;" source="Congregibacter litoralis KT71.;"
adenine-specific DNA methylase-like protein
scnpilot_solids1_trim150_scaffold_1146_3
Congregibacter litoralis, Congregibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2878..4185)
DNA (1308bp) protein (436aa)
Uncharacterized protein n=2 Tax=Congregibacter RepID=A4ABC7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAQ96681.2}; TaxID=314285 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Congregibacter.;" source="Congregibacter litoralis KT71.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1146_4
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4185..5654)
DNA (1470bp) protein (490aa)
DGQHR domain protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VVR1_9SPHN rbh
DGQHR domain protein {ECO:0000313|EMBL:EJU12113.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_1146_5
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6308..7390
DNA (1083bp) protein (361aa)
LuxR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W0M1_9SPHN
LuxR family transcriptional regulator {ECO:0000313|EMBL:ENY81037.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
LuxR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_1146_6
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7749..8795
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9NX00_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EPX55436.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
Sel1 domain repeat-containing protein
scnpilot_solids1_trim150_scaffold_1146_7
unknown

Not on your lists

8815..10014
DNA (1200bp) protein (400aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1146_8
Erythrobacter longus, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10011..10949
DNA (939bp) protein (313aa)
Sel1 domain protein repeat-containing protein n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD0E8D
Uncharacterized protein {ECO:0000313|EMBL:KEO88656.1}; TaxID=1044 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter longus.;"
Sel1 domain-containing protein repeat-containing protein; K07126
scnpilot_solids1_trim150_scaffold_1146_9
Rhizophagus irregularis, Rhizophagus, Glomerales, Glomeromycetes, Glomeromycota, Fungi

Not on your lists

10952..12331
DNA (1380bp) protein (460aa)
Sel1 repeat protein n=1 Tax=Megasphaera sp. UPII 135-E RepID=F9MMU0_9FIRM
Ste7p {ECO:0000313|EMBL:EXX74393.1}; TaxID=1432141 species="Eukaryota; Fungi; Glomeromycota; Glomeromycetes; Glomerales; Glomeraceae; Rhizophagus.;" source="Rhizophagus irregularis DAOM 197198w.;"
Sel1 domain-containing protein repeat-containing protein; K07126
scnpilot_solids1_trim150_scaffold_1146_10
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12750..13172)
DNA (423bp) protein (141aa)
cell wall hydrolase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC53E
Putative SleB-like protein {ECO:0000313|EMBL:GAO39559.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
scnpilot_solids1_trim150_scaffold_1146_11
Paracoccus sphaerophysae, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13452..14615)
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4WYZ0_RHOS5 rbh
Integrase {ECO:0000313|EMBL:KGJ08121.1}; TaxID=690417 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sphaerophysae.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_1146_12
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15704..15922)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UV01_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82275.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
scnpilot_solids1_trim150_scaffold_1146_13
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16061..16969)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WFS3_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY82276.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1146_14
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16979..19639)
DNA (2661bp) protein (887aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W420_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY82277.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein; K07347 outer membrane usher protein rbh
scnpilot_solids1_trim150_scaffold_1146_15
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19636..20439)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WEY6_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY82278.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_1146_16
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20540..21295)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UVI3_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY82279.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_1146_17
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21441..21968)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UV05_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY82280.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1146_18
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22425..23312
DNA (888bp) protein (296aa)
Helix-turn-helix domain-containing protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WFS6_9SPHN rbh
Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:ENY82281.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
helix-turn-helix domain-containing protein
scnpilot_solids1_trim150_scaffold_1146_19
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23329..23511)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W425_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82282.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
scnpilot_solids1_trim150_scaffold_1146_20
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23591..24241)
DNA (651bp) protein (217aa)
TetR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WEY8_9SPHN rbh
TetR family transcriptional regulator {ECO:0000313|EMBL:ENY82283.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
TetR family transcriptional regulator rbh
scnpilot_solids1_trim150_scaffold_1146_21
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24295..25725
DNA (1431bp) protein (477aa)
RND efflux system, outer membrane lipoprotein, NodT n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UVI6_9SPHN rbh
RND efflux system, outer membrane lipoprotein, NodT {ECO:0000313|EMBL:ENY82284.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
RND efflux system, outer membrane lipoprotein, NodT rbh
scnpilot_solids1_trim150_scaffold_1146_22
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25722..26603
DNA (882bp) protein (294aa)
Secretion protein HlyD n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UV09_9SPHN rbh
Secretion protein HlyD {ECO:0000313|EMBL:ENY82285.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
secretion protein HlyD; K03543 multidrug resistance protein A rbh
Displaying 22 items

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