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scnpilot_solids1_trim150_scaffold_1149

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1149_1
unknown

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comp(2..430)
DNA (429bp) protein (143aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1149_2
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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537..1427
DNA (891bp) protein (297aa)
ABC transporter substrate-binding protein; K02016 iron complex transport system substrate-binding protein id=12495243 bin=THIO_HI species=Chryseobacterium taeanense genus=Chryseobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=THIO_HI organism_group=Betaproteobacteria rbh
ABC transporter substrate-binding protein; K02016 iron complex transport system substrate-binding protein
ABC-type transporter, periplasmic subunit {ECO:0000313|EMBL:AEF89181.1}; Flags: Precursor;; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
scnpilot_solids1_trim150_scaffold_1149_3
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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1564..2616
DNA (1053bp) protein (351aa)
Transport system permease n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6XSQ1_9RHOO rbh
Transport system permease {ECO:0000313|EMBL:ENO84786.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lol = DSM 12138.;"
transport system permease; K02015 iron complex transport system permease protein rbh
scnpilot_solids1_trim150_scaffold_1149_4
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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2616..3395
DNA (780bp) protein (260aa)
ABC transporter ATP-binding protein; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34] id=12495240 bin=THIO_HI species=Thauera linaloolentis genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
ABC transporter ATP-binding protein; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34]
Iron ABC transporter ATP-binding protein {ECO:0000313|EMBL:ENO84787.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lol = DSM 12138.;"
scnpilot_solids1_trim150_scaffold_1149_5
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3392..3895
DNA (504bp) protein (168aa)
radical SAM protein; K01012 biotin synthetase [EC:2.8.1.6] id=12495239 bin=THIO_HI species=Hyphomicrobium denitrificans genus=Hyphomicrobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
radical SAM protein; K01012 biotin synthetase [EC:2.8.1.6]
Radical SAM domain protein {ECO:0000313|EMBL:ADJ23576.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
scnpilot_solids1_trim150_scaffold_1149_6
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3895..6102
DNA (2208bp) protein (736aa)
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein id=12495238 bin=THIO_HI species=Nitrobacter hamburgensis genus=Nitrobacter taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein rbh
TonB-dependent receptor {ECO:0000313|EMBL:ABE61810.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
scnpilot_solids1_trim150_scaffold_1149_7
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6161..8467
DNA (2307bp) protein (769aa)
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein id=12495237 bin=THIO_HI species=Desulfobacter curvatus genus=Desulfobacter taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
TonB-dependent receptor {ECO:0000313|EMBL:ABA05330.1}; Flags: Precursor;; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
scnpilot_solids1_trim150_scaffold_1149_8
Aminomonas paucivorans, Aminomonas, Synergistales, Synergistia, Synergistetes, Bacteria

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8469..9497
DNA (1029bp) protein (343aa)
ABC-type Fe3+-hydroxamate transport system, periplasmic component id=12495236 bin=THIO_HI species=Aminomonas paucivorans genus=Aminomonas taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=THIO_HI organism_group=Betaproteobacteria rbh
Periplasmic binding protein {ECO:0000313|EMBL:EFQ22873.1}; TaxID=584708 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminomonas.;" source="Aminomonas paucivorans DSM 12260.;"
ABC-type Fe3+-hydroxamate transport system, periplasmic component
scnpilot_solids1_trim150_scaffold_1149_9
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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9556..10611
DNA (1056bp) protein (352aa)
type 12 methyltransferase id=12495235 bin=THIO_HI species=Spirochaeta bajacaliforniensis genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=THIO_HI organism_group=Betaproteobacteria rbh
type 12 methyltransferase rbh
Methyltransferase type 12 {ECO:0000313|EMBL:ADK82917.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
scnpilot_solids1_trim150_scaffold_1149_10
Methylomicrobium album, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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10637..11722
DNA (1086bp) protein (362aa)
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein id=12495234 bin=THIO_HI species=Methylomicrobium album genus=Methylomicrobium taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
ABC-type Fe3+-hydroxamate transport system, periplasmic component {ECO:0000313|EMBL:EIC29031.1}; TaxID=686340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium album BG8.;"
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein rbh
scnpilot_solids1_trim150_scaffold_1149_11
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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11753..12829
DNA (1077bp) protein (359aa)
type 12 methyltransferase id=12495233 bin=THIO_HI species=Thauera linaloolentis genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
O-methyltransferase family protein {ECO:0000313|EMBL:ENO84790.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lol = DSM 12138.;"
O-methyltransferase family protein
scnpilot_solids1_trim150_scaffold_1149_12
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12840..13703
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6XSQ7_9RHOO rbh
Uncharacterized protein {ECO:0000313|EMBL:ENO84791.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lol = DSM 12138.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_1149_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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13700..14461
DNA (762bp) protein (254aa)
tonB1; putative TonB protein; K03832 periplasmic protein TonB id=12495232 bin=THIO_HI species=Azoarcus sp. genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
tonB1; putative TonB protein; K03832 periplasmic protein TonB
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
scnpilot_solids1_trim150_scaffold_1149_14
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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14470..15186
DNA (717bp) protein (239aa)
MotA/TolQ/ExbB proton channel family protein; K03561 biopolymer transport protein ExbB id=12495231 bin=THIO_HI species=Nevskia ramosa genus=Nevskia taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
MotA/TolQ/ExbB proton channel family protein; K03561 biopolymer transport protein ExbB
Tax=RBG_16_Betaproteobacteria_58_11_curated
scnpilot_solids1_trim150_scaffold_1149_15
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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15186..15620
DNA (435bp) protein (145aa)
Biopolymer transport protein ExbD/TolR; K03559 biopolymer transport protein ExbD id=12495230 bin=THIO_HI species=Nitrosomonas sp. genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Biopolymer transport protein ExbD/TolR; K03559 biopolymer transport protein ExbD
Tax=RBG_16_Betaproteobacteria_58_11_curated
scnpilot_solids1_trim150_scaffold_1149_16
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

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15617..15964
DNA (348bp) protein (116aa)
Uncharacterized protein id=12495229 bin=THIO_HI species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=THIO_HI organism_group=Betaproteobacteria
Tax=RBG_16_Chloroflexi_48_8_curated
Displaying 16 items

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