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scnpilot_solids1_trim150_scaffold_1162

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1162_1
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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73..678
DNA (606bp) protein (202aa)
Tetracycline regulation of excision, RteC n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C771_SPHS2
Tetracycline regulation of excision, RteC {ECO:0000313|EMBL:KGO08679.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
tetracycline regulation of excision RteC
scnpilot_solids1_trim150_scaffold_1162_2
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(683..6118)
DNA (5436bp) protein (1812aa)
Helicase C-terminal domain protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W2U8_9FLAO rbh
Putative DNA methylase {ECO:0000313|EMBL:AIL44276.1}; TaxID=1338011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis NUHP1.;"
helicase family protein rbh
scnpilot_solids1_trim150_scaffold_1162_3
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(6108..6548)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VZW2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EFK33892.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1162_4
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6703..7245
DNA (543bp) protein (181aa)
Uncharacterized protein n=3 Tax=Elizabethkingia RepID=T0NF36_ELIME
Uncharacterized protein {ECO:0000313|EMBL:KEQ30206.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
deaminase-reductase domain-containing protein
scnpilot_solids1_trim150_scaffold_1162_5
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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7403..8368
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI0003773069 rbh
MarR family transcriptional regulator {ECO:0000313|EMBL:KFC18861.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
MarR family transcriptional regulator rbh
scnpilot_solids1_trim150_scaffold_1162_6
Flavobacteriales bacterium ALC-1, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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8365..8610
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UNE4_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EDP70026.1}; TaxID=391603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium ALC-1.;"
scnpilot_solids1_trim150_scaffold_1162_7
Chryseobacterium sp. P1-3, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(8758..9639)
DNA (882bp) protein (294aa)
Putative toxin-antitoxin system, toxin component, Fic family n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FRT3_9SPHI rbh
DNA-binding protein {ECO:0000313|EMBL:KFF76089.1}; TaxID=1517683 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. P1-3.;"
KilA-N, DNA-binding domain-containing protein rbh
scnpilot_solids1_trim150_scaffold_1162_8
Chryseobacterium sp. P1-3, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9629..11719)
DNA (2091bp) protein (697aa)
DNA topoisomerase III; K03169 DNA topoisomerase III [EC:5.99.1.2] rbh
DNA topoisomerase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W2U5_9FLAO rbh
DNA topoisomerase I {ECO:0000313|EMBL:KFF76088.1}; TaxID=1517683 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. P1-3.;"
scnpilot_solids1_trim150_scaffold_1162_9
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11722..13173)
DNA (1452bp) protein (484aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VNU4_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:EFK57591.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1162_10
Chryseobacterium sp. P1-3, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13273..13554)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W2U3_9FLAO
Excisionase {ECO:0000313|EMBL:KFF76086.1}; TaxID=1517683 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. P1-3.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1162_11
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13566..13919)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W2U2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EFK34653.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1162_12
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14182..15027)
DNA (846bp) protein (282aa)
RteC protein n=2 Tax=Sphingobacterium spiritivorum RepID=C2FXH4_9SPHI rbh
RteC protein {ECO:0000313|EMBL:EFK57593.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
RteC protein rbh
scnpilot_solids1_trim150_scaffold_1162_13
Rhodonellum psychrophilum, Rhodonellum, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

15780..18824
DNA (3045bp) protein (1015aa)
Uncharacterized protein n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BX80_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:ERM82174.1}; TaxID=1123057 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71 = DSM 17998.;"
TonB-linked outer membrane protein, SusC/RagA family rbh
scnpilot_solids1_trim150_scaffold_1162_14
Rhodonellum psychrophilum, Rhodonellum, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

18885..20201
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BWB0_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:ERM82173.1}; TaxID=1123057 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71 = DSM 17998.;"
RagB/SusD family protein rbh
scnpilot_solids1_trim150_scaffold_1162_15
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20306..22825
DNA (2520bp) protein (840aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003816385
Zinc carboxypeptidase {ECO:0000313|EMBL:KIC89434.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
peptidase M14 carboxypeptidase A
scnpilot_solids1_trim150_scaffold_1162_16
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23051..23410
DNA (360bp) protein (120aa)
ABC transporter n=1 Tax=Niabella aurantiaca RepID=UPI000381AC93
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:GAO43625.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
ABC transporter; K15738 ATP-binding cassette, subfamily F, uup
Displaying 16 items

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