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scnpilot_solids1_trim150_scaffold_1205

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1205_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..1089)
DNA (1089bp) protein (363aa)
Copper-resistance protein, CopA family n=1 Tax=Rhodanobacter denitrificans RepID=M4NFL4_9GAMM
copper-resistance protein, CopA family
Copper-resistance protein, CopA family {ECO:0000313|EMBL:AGG88842.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1205_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1741..2070)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NM93_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88841.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1205_3
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2535..2771
DNA (237bp) protein (79aa)
copF; putative copper-transporting p-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
hypothetical protein, partial n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000369E4B2
Copper ABC transporter ATPase {ECO:0000313|EMBL:KGM56802.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
scnpilot_solids1_trim150_scaffold_1205_4
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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2816..3238
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000361C47D
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_1205_5
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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3368..4690
DNA (1323bp) protein (441aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000379C9FE
Outer membrane efflux protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_1205_6
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4687..6177
DNA (1491bp) protein (497aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00030A875A
NODE_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ96323.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
CzcB family heavy metal RND efflux membrane fusion protein; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB
scnpilot_solids1_trim150_scaffold_1205_7
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6179..9331
DNA (3153bp) protein (1051aa)
NODE_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ96324.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
Heavy metal efflux pump CzcA id=2992322 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria rbh
heavy metal efflux pump CzcA
scnpilot_solids1_trim150_scaffold_1205_8
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9679..10191
DNA (513bp) protein (171aa)
MerR family transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EED2B9
MerR family transcriptional regulator
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_1205_9
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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10188..10502
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI000380AAA7
hypothetical protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_1205_10
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10504..11160
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002ECA994
hypothetical protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_1205_11
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11160..11675
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F34D00
Uncharacterized protein {ECO:0000313|EMBL:KFN47044.1}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1205_12
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11758..13143
DNA (1386bp) protein (462aa)
beta-Casp domain-containing protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F159E2
mRNA 3'-end processing factor {ECO:0000313|EMBL:KGM50716.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
beta-lactamase domain-containing protein; K07576 metallo-beta-lactamase family protein rbh
scnpilot_solids1_trim150_scaffold_1205_13
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13140..14657
DNA (1518bp) protein (506aa)
thymidine phosphorylase (EC:2.4.2.4)
Putative thymidine phosphorylase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WMB4_9GAMM
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_1205_14
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14654..14995
DNA (342bp) protein (114aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030A3926
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
Displaying 14 items

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