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scnpilot_solids1_trim150_scaffold_1210

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1210_1
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..787
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000348A13F
Uncharacterized protein {ECO:0000313|EMBL:KGM52737.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
scnpilot_solids1_trim150_scaffold_1210_2
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

843..2366
DNA (1524bp) protein (508aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00036965C8
hypothetical protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
scnpilot_solids1_trim150_scaffold_1210_3
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2470..2961
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI000361E3AF
Membrane-flanked domain protein {ECO:0000313|EMBL:EFC84098.1}; Flags: Precursor;; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
hypothetical protein; K09167 hypothetical protein
scnpilot_solids1_trim150_scaffold_1210_4
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2958..4370
DNA (1413bp) protein (471aa)
Membrane-flanked domain protein n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FFD4_VERMA
hypothetical protein; K08981 putative membrane protein
Membrane-flanked domain protein {ECO:0000313|EMBL:AEB46236.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
scnpilot_solids1_trim150_scaffold_1210_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4371..5279)
DNA (909bp) protein (303aa)
PAS/PAC sensor-containing diguanylate cyclase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWC9_9GAMM
PAS/PAC sensor-containing diguanylate cyclase {ECO:0000313|EMBL:EIL91520.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
PAS/PAC sensor-containing diguanylate cyclase
scnpilot_solids1_trim150_scaffold_1210_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5360..5950)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4G3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94354.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_1210_7
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(6021..6404)
DNA (384bp) protein (128aa)
hypothetical protein id=3875406 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
scnpilot_solids1_trim150_scaffold_1210_8
unknown

Not on your lists

comp(6401..6688)
DNA (288bp) protein (96aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1210_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7077..7598)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WQ19_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89619.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1210_10
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7943..8854
DNA (912bp) protein (304aa)
LysR family transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=I4WQ18_9GAMM
transcriptional regulator
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
scnpilot_solids1_trim150_scaffold_1210_11
Mesorhizobium sp. LSHC426A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8887..9729)
DNA (843bp) protein (281aa)
UPI0003CF4ABE related cluster n=1 Tax=unknown RepID=UPI0003CF4ABE rbh
Uncharacterized protein {ECO:0000313|EMBL:ESX45118.1}; TaxID=1287298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC426A00.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_1210_12
GWF2_Planctomycetes_41_51_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

10020..10907
DNA (888bp) protein (296aa)
Putative uncharacterized protein id=2844444 bin=GWF2_Planctomycete_41_51 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
hypothetical protein
Tax=GWF2_Planctomycetes_41_51_curated
scnpilot_solids1_trim150_scaffold_1210_13
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11516..13636)
DNA (2121bp) protein (707aa)
X-Pro dipeptidyl-peptidase domain-containing protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7L1_9GAMM
Glutaryl-7-ACA acylase {ECO:0000313|EMBL:KGI78371.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
X-Pro dipeptidyl-peptidase domain-containing protein
scnpilot_solids1_trim150_scaffold_1210_14
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13651..13929
DNA (279bp) protein (93aa)
Plasmid maintenance system killer protein n=1 Tax=Pseudomonas stutzeri TS44 RepID=I4JIM2_PSEST
Killer protein {ECO:0000313|EMBL:EZH79197.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes AD6.;"
plasmid maintenance system killer protein; K07334 proteic killer suppression protein
scnpilot_solids1_trim150_scaffold_1210_15
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13929..14222
DNA (294bp) protein (98aa)
XRE family transcriptional regulator n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI0003622A4A
yddM; transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
scnpilot_solids1_trim150_scaffold_1210_16
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14254..14544
DNA (291bp) protein (97aa)
XRE family transcriptional regulator n=1 Tax=Dyella ginsengisoli RepID=UPI000344FA0C
Uncharacterized protein {ECO:0000313|EMBL:KGM57823.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
virulence associated protein
scnpilot_solids1_trim150_scaffold_1210_17
Thauera aminoaromatica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14757..14939
DNA (183bp) protein (61aa)
aspartate racemase; K01779 aspartate racemase [EC:5.1.1.13]
Aspartate racemase n=1 Tax=Thauera aminoaromatica S2 RepID=N6YU56_9RHOO
Aspartate racemase {ECO:0000313|EMBL:ENO83499.1}; TaxID=1234381 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera aminoaromatica S2.;"
Displaying 17 items

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