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scnpilot_solids1_trim150_scaffold_1236

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1236_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..396
DNA (396bp) protein (132aa)
Methylmalonyl-CoA mutase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WMN1_9GAMM
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:EIM00723.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
methylmalonyl-CoA mutase, N-terminal domain/subunit
scnpilot_solids1_trim150_scaffold_1236_2
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

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545..2578
DNA (2034bp) protein (678aa)
Putative uncharacterized protein n=1 Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2J3Z1_PSEUL rbh
Uncharacterized protein {ECO:0000313|EMBL:KIJ75006.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_1236_3
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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2772..3296
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AN65_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAO37071.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1236_4
unknown

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3297..3632
DNA (336bp) protein (112aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1236_5
unknown

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3704..3811
DNA (108bp) protein (36aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1236_6
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3937..4188)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Escherichia coli HVH 162 (4-5627982) RepID=T7IY83_ECOLX
Histidine kinase {ECO:0000313|EMBL:KGE10274.1}; TaxID=28095 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (Pseudomonas marginata) (Phytomonas marginata).;"
histidine kinase
scnpilot_solids1_trim150_scaffold_1236_7
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4283..4987)
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034976A3
Transposase {ECO:0000313|EMBL:KFA05669.1}; TaxID=1094183 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. musacearum NCPPB 2005.;"
hypothetical protein; K07491 putative transposase
scnpilot_solids1_trim150_scaffold_1236_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5169..5774
DNA (606bp) protein (202aa)
Large protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU51_9GAMM
Large protein {ECO:0000313|EMBL:EIL90742.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
A nuclease of the HNH/ENDO VII superwith conserved AHH family protein
scnpilot_solids1_trim150_scaffold_1236_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5783..6343
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4H3_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL94364.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_1236_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7050..7853
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4H2_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL94363.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1236_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8016..8669)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4H1_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL94362.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_1236_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9059..9328)
DNA (270bp) protein (90aa)
Transposase n=1 Tax=Rhodanobacter denitrificans RepID=M4NHQ7_9GAMM
transposase
Transposase {ECO:0000313|EMBL:AGG89627.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1236_13
unknown

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comp(9374..10672)
DNA (1299bp) protein (433aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1236_14
unknown

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comp(11282..11575)
DNA (294bp) protein (98aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1236_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11667..13325
DNA (1659bp) protein (553aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4G9_9GAMM rbh
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:EIL94360.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
scnpilot_solids1_trim150_scaffold_1236_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13392..14087)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4G8_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL94359.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1236_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14293..14706)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4G7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94358.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
Displaying 17 items

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