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scnpilot_solids1_trim150_scaffold_1294

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1294_1
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1..486
DNA (486bp) protein (162aa)
Transcriptional regulator, AraC family n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IXR2_METNO
Cupin {ECO:0000313|EMBL:KFA90173.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
AraC family transcriptional regulator
scnpilot_solids1_trim150_scaffold_1294_2
Rhodobacteraceae bacterium HTCC2150, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

554..1009
DNA (456bp) protein (152aa)
Transposase n=1 Tax=Rhodobacteraceae bacterium HTCC2150 RepID=A3JV74_9RHOB
Transposase {ECO:0000313|EMBL:EBA02469.1}; TaxID=388401 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium HTCC2150.;"
integrase
scnpilot_solids1_trim150_scaffold_1294_3
unknown

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comp(850..1221)
DNA (372bp) protein (124aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1294_4
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1263..2309
DNA (1047bp) protein (349aa)
Type III restriction protein res subunit n=1 Tax=Caulobacter sp. (strain K31) RepID=B0TA14_CAUSK
type III restriction protein res subunit
Type III restriction protein res subunit {ECO:0000313|EMBL:ABZ74563.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
scnpilot_solids1_trim150_scaffold_1294_5
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2651..4084
DNA (1434bp) protein (478aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RVS9_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CCD86056.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_1294_6
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4150..4446)
DNA (297bp) protein (99aa)
addiction module antitoxin n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003B64967
Uncharacterized protein {ECO:0000313|EMBL:KJC60299.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
XRE family transcriptional regulator
scnpilot_solids1_trim150_scaffold_1294_7
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4487..4771)
DNA (285bp) protein (95aa)
Plasmid maintenance system killer n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QAZ2_RHOPT
Killer protein {ECO:0000313|EMBL:KJC60298.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
plasmid maintenance system killer protein; K07334 proteic killer suppression protein
scnpilot_solids1_trim150_scaffold_1294_8
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5782..6060
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Ochrobactrum intermedium 229E RepID=U4V2M0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ERM00240.1}; TaxID=1337887 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium 229E.;"
transposase IS116/IS110/IS902
scnpilot_solids1_trim150_scaffold_1294_9
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6438..6908
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PX27_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42898.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
MarR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_1294_10
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6901..8172
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PQ04_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42899.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
EmrA family multidrug resistance transporter protein rbh
scnpilot_solids1_trim150_scaffold_1294_11
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8165..9706
DNA (1542bp) protein (514aa)
Drug:H+ antiporter-2 (14 Spanner) (DHA2) family drug resistance MFS transporter n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PTM3_9BRAD rbh
DSBA oxidoreductase {ECO:0000313|EMBL:KJC54424.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
drug resistance transporter, EmrB/QacA subfamily rbh
scnpilot_solids1_trim150_scaffold_1294_12
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9838..10131)
DNA (294bp) protein (98aa)
Transposase orfA IS5 family element n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X1T0_9BRAD
Transposase orfA IS5 family element {ECO:0000313|EMBL:EAQ33807.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
transposase
scnpilot_solids1_trim150_scaffold_1294_13
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10247..11560)
DNA (1314bp) protein (438aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPK0_NITHX rbh
periplasmic sensor signal transduction histidine kinase rbh
scnpilot_solids1_trim150_scaffold_1294_14
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11557..12219)
DNA (663bp) protein (221aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPJ9_NITHX rbh
two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator rbh
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABE61848.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
scnpilot_solids1_trim150_scaffold_1294_15
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12466..13248
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PMW2_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42129.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_1294_16
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13287..13700
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PRH7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42130.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1294_17
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13750..14502
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4J6_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI52876.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_1294_18
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14519..15328
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPJ7_NITHX rbh
Uncharacterized protein {ECO:0000313|EMBL:CEG06666.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_1294_19
unknown

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15557..15889
DNA (333bp) protein (111aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1294_20
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15892..16203
DNA (312bp) protein (104aa)
Tat (Twin-arginine translocation) pathway signal sequence n=1 Tax=Afipia felis ATCC 53690 RepID=K8NCP3_AFIFE
Tat (Twin-arginine translocation) pathway signal sequence {ECO:0000313|EMBL:EKS28352.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
sufI; multicopper oxidase
Displaying 20 items

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