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scnpilot_solids1_trim150_scaffold_1307

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1307_1
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..585)
DNA (585bp) protein (195aa)
Helicase protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QT18_BREDI
Helicase protein {ECO:0000313|EMBL:EKY30697.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
helicase
scnpilot_solids1_trim150_scaffold_1307_2
unknown

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comp(754..891)
DNA (138bp) protein (46aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1307_trna_1
unknown

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871..944
DNA (74bp)
transferRNA Arg
scnpilot_solids1_trim150_scaffold_1307_3
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1277..2089
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI00037B8EAD
GntR family transcriptional regulator
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
scnpilot_solids1_trim150_scaffold_1307_4
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2089..3162
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI00037460CF rbh
Beta-lactamase {ECO:0000313|EMBL:AJA08560.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
beta-lactamase rbh
scnpilot_solids1_trim150_scaffold_1307_5
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3292..4860
DNA (1569bp) protein (523aa)
AMP-dependent synthetase and ligase n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SWS9_CAUSK rbh
AMP-dependent synthetase and ligase rbh
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ABZ73137.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
scnpilot_solids1_trim150_scaffold_1307_6
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5008..6282)
DNA (1275bp) protein (425aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI0003755E2A rbh
Sphingomonas taxi strain 30a NODE_24, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26104.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
major facilitator transporter rbh
scnpilot_solids1_trim150_scaffold_1307_7
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6279..6956)
DNA (678bp) protein (226aa)
Glutathione S-transferase n=1 Tax=Alcanivorax sp. PN-3 RepID=U7I3U0_9GAMM
Glutathione S-transferase-like protein {ECO:0000313|EMBL:EZP83106.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
gst; glutathione S-transferase
scnpilot_solids1_trim150_scaffold_1307_8
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7213..8454
DNA (1242bp) protein (414aa)
beta-lactamase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CDDD0 rbh
Beta-lactamase {ECO:0000313|EMBL:AIT05897.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
beta-lactamase
scnpilot_solids1_trim150_scaffold_1307_9
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8564..10924)
DNA (2361bp) protein (787aa)
TonB-dependent receptor n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQ60_SPHAL
TonB-dependent receptor
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
scnpilot_solids1_trim150_scaffold_1307_10
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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11229..12527
DNA (1299bp) protein (433aa)
MFS transporter n=1 Tax=Azospirillum amazonense Y2 RepID=G1XZW8_9PROT rbh
MFS transporter {ECO:0000313|EMBL:EGY01188.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
MFS transporter rbh
scnpilot_solids1_trim150_scaffold_1307_11
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12570..13910
DNA (1341bp) protein (447aa)
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI00035D0BA9 rbh
Uncharacterized protein {ECO:0000313|EMBL:AJA08567.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_1307_12
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13954..14142
DNA (189bp) protein (63aa)
Short chain dehydrogenase family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWS4_BREDI
Short chain dehydrogenase family protein {ECO:0000313|EMBL:EGF95478.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
short-chain dehydrogenase/reductase SDR
Displaying 13 items

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