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scnpilot_solids1_trim150_scaffold_1329

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1329_1
unknown

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1..117
DNA (117bp) protein (39aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1329_2
Mycobacterium canettii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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167..448
DNA (282bp) protein (94aa)
Transposase n=1 Tax=Mycobacterium canettii CIPT 140060008 RepID=L0PWF0_9MYCO
Transposase (fragment)
Transposase, IS21 family protein {ECO:0000313|EMBL:CCC44649.1}; TaxID=1048245 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium canettii (strain CIPT 140010059).;"
scnpilot_solids1_trim150_scaffold_1329_3
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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523..1098
DNA (576bp) protein (192aa)
Transposase n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GWG8_9GAMM
transposase
Transposase {ECO:0000313|EMBL:AGA89644.1}; Flags: Precursor;; TaxID=765912 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thioflavicoccus.;" source="Thioflavicoccus mobilis 8321.;"
scnpilot_solids1_trim150_scaffold_1329_4

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1430..2245
DNA (816bp) protein (272aa)
llo:LLO_0997 hypothetical protein; K06860 id=108645 bin=ACD73 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD73 organism_group=Proteobacteria organism_desc=Unknown
Uncharacterized protein {ECO:0000313|EMBL:EKD42197.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein; K06860 uncharacterized protein
scnpilot_solids1_trim150_scaffold_1329_5
R_Alphaproteobacteria_63_12, Alphaproteobacteria, Proteobacteria, Bacteria

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2442..4532
DNA (2091bp) protein (697aa)
Type III restriction protein, restriction subunit n=1 Tax=Oleispira antarctica RB-8 RepID=R4YP53_OLEAN rbh
type III restriction protein res subunit rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_63_12_curated
scnpilot_solids1_trim150_scaffold_1329_6
unknown

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4525..4761
DNA (237bp) protein (79aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1329_7
R_Alphaproteobacteria_63_12, Alphaproteobacteria, Proteobacteria, Bacteria

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4763..6763
DNA (2001bp) protein (667aa)
Uncharacterized protein n=1 Tax=Oleispira antarctica RB-8 RepID=R4YPI6_OLEAN rbh
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_63_12_curated
scnpilot_solids1_trim150_scaffold_1329_8
R_Alphaproteobacteria_63_12, Alphaproteobacteria, Proteobacteria, Bacteria

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6760..7140
DNA (381bp) protein (127aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_63_12_curated
scnpilot_solids1_trim150_scaffold_1329_9
RLO_OD1_Jorgensenbacteria_42_11, Jorgensenbacteria, Parcubacteria, Bacteria

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7146..8837
DNA (1692bp) protein (564aa)
RNA polymerase sigma70 factor n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI00037F24F7
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor
Tax=RIFCSPLOWO2_12_FULL_OD1_Jorgensenbacteria_42_11_curated
scnpilot_solids1_trim150_scaffold_1329_10
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8803..9276)
DNA (474bp) protein (158aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
DNA methylase N-4/N-6 domain-containing protein n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GPG4_THISH
DNA methylase N-4/N-6 domain-containing protein
scnpilot_solids1_trim150_scaffold_1329_11
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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9945..10340
DNA (396bp) protein (132aa)
Transposase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U2N7_9CHLR
Transposase {ECO:0000313|EMBL:EFH81001.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
scnpilot_solids1_trim150_scaffold_1329_12
unknown

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comp(10484..10882)
DNA (399bp) protein (133aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1329_13
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10962..11414
DNA (453bp) protein (151aa)
Transposase IstB-like ATP-binding protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J6L0_POLGS
Transposase IstB-like ATP-binding protein {ECO:0000313|EMBL:GAO23851.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
transposase IstB-like ATP-binding protein
scnpilot_solids1_trim150_scaffold_1329_14
Methanofollis liminatans, Methanofollis, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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11411..11698
DNA (288bp) protein (96aa)
ADP-ribosylation/Crystallin J1 n=1 Tax=Methanofollis liminatans DSM 4140 RepID=J1L3G3_9EURY
ADP-ribosylation/Crystallin J1 {ECO:0000313|EMBL:EJG07260.1}; TaxID=28892 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanofollis.;" source="Methanofollis liminatans DSM 4140.;"
ADP-ribosylglycohydrolase
scnpilot_solids1_trim150_scaffold_1329_15
Paenibacillus sp. FSL R5-192, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11704..11988
DNA (285bp) protein (95aa)
ADP-ribosylglycohydrolase; K05521 ADP-ribosylglycohydrolase [EC:3.2.-.-]
ADP-ribosylglycohydrolase n=1 Tax=Paenibacillus sp. PAMC 26794 RepID=UPI0002E9A971
ADP-ribosylglycohydrolase {ECO:0000313|EMBL:ETT39466.1}; TaxID=1226754 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R5-192.;"
scnpilot_solids1_trim150_scaffold_1329_16
unknown

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12049..12204
DNA (156bp) protein (52aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1329_17
unknown

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comp(12254..12862)
DNA (609bp) protein (203aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1329_18
unknown

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12905..13534
DNA (630bp) protein (210aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1329_19
unknown

Not on your lists

comp(13553..13852)
DNA (300bp) protein (100aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1329_20
unknown

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comp(13849..14010)
DNA (162bp) protein (54aa)

This feature has no annotations

Displaying 20 items

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