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scnpilot_solids1_trim150_scaffold_1355

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1355_1
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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386..1483
DNA (1098bp) protein (366aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
Gmd, NV16873; GDP-mannose 4,6 dehydratase; K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47]
UPI0003CEC20D related cluster n=1 Tax=unknown RepID=UPI0003CEC20D
scnpilot_solids1_trim150_scaffold_1355_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1640..4345
DNA (2706bp) protein (902aa)
hypothetical protein n=1 Tax=Comamonas sp. B-9 RepID=UPI000395BA15 rbh
Variovorax paradoxus strain MEDvA23 contig_135, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ16300.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1355_3
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4378..5280
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002376970
Variovorax paradoxus strain MEDvA23 contig_135, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ16299.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
scnpilot_solids1_trim150_scaffold_1355_4
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5357..6124
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Synechococcus sp. PCC 7336 RepID=UPI000346E13F
Variovorax paradoxus strain MEDvA23 contig_135, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ16298.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
family 2 glycosyl transferase
scnpilot_solids1_trim150_scaffold_1355_5
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

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comp(6133..9108)
DNA (2976bp) protein (992aa)
Glycosyltransferase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIA7_CHLTF
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:AEP11565.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
scnpilot_solids1_trim150_scaffold_1355_6
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9221..10474)
DNA (1254bp) protein (418aa)
Glycosyl transferase, group 1 n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TNV9_ACIAC
group 1 glycosyl transferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABM32647.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
scnpilot_solids1_trim150_scaffold_1355_7
R_Dadabacteria_53_21, Dadabacteria, Bacteria

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10527..10817
DNA (291bp) protein (97aa)
Glycosyl transferase family 2 n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J2F6_FRASU
family 2 glycosyl transferase
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
scnpilot_solids1_trim150_scaffold_1355_8
unknown

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10877..11125
DNA (249bp) protein (83aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1355_9
R_Dadabacteria_53_21, Dadabacteria, Bacteria

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11159..12283
DNA (1125bp) protein (375aa)
glycosyltransferase (EC:2.4.-.-)
Glycosyltransferase n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5A5Y2_9ACTN
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
scnpilot_solids1_trim150_scaffold_1355_10
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12276..13235
DNA (960bp) protein (320aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TLE4_MESCW rbh
NAD-dependent epimerase/dehydratase rbh
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ADV12695.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
scnpilot_solids1_trim150_scaffold_1355_11
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13685..13840)
DNA (156bp) protein (52aa)
HNH endonuclease family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWN3_BREDI
HNH endonuclease family protein {ECO:0000313|EMBL:EGF95437.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
HNH endonuclease
Displaying 11 items

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