ggKbase home page

scnpilot_solids1_trim150_scaffold_1380

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1380_1
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..222)
DNA (222bp) protein (74aa)
Alcohol dehydrogenase, zinc-binding domain protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W6L2_ACISJ
alcohol dehydrogenase; K07119
Alcohol dehydrogenase, zinc-binding domain protein {ECO:0000313|EMBL:ABM41887.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_solids1_trim150_scaffold_1380_2
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(290..646)
DNA (357bp) protein (119aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BW81_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHL23460.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1380_3
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(701..1495)
DNA (795bp) protein (265aa)
short-chain dehydrogenase/reductase sdr; K00046 gluconate 5-dehydrogenase [EC:1.1.1.69] rbh
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AEB84459.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AEB84459.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Short-chain dehydrogenase/reductase SDR n=2 Tax=Alicycliphilus denitrificans RepID=E8TXH7_ALIDB rbh
scnpilot_solids1_trim150_scaffold_1380_4
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1628..2488
DNA (861bp) protein (287aa)
glutamate racemase (EC:5.1.1.3); K01776 glutamate racemase [EC:5.1.1.3]
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Glutamate racemase n=2 Tax=Alicycliphilus denitrificans RepID=E8TU93_ALIDB
scnpilot_solids1_trim150_scaffold_1380_5
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2495..3118)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MG64_ACIET
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM42781.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_solids1_trim150_scaffold_1380_trna_3
unknown

Not on your lists

comp(3133..3222)
DNA (90bp)
transferRNA Leu
scnpilot_solids1_trim150_scaffold_1380_6
unknown

Not on your lists

comp(3210..3317)
DNA (108bp) protein (36aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1380_trna_2
unknown

Not on your lists

comp(3355..3427)
DNA (73bp)
transferRNA Gly
scnpilot_solids1_trim150_scaffold_1380_trna_1
unknown

Not on your lists

comp(3467..3537)
DNA (71bp)
transferRNA Cys
scnpilot_solids1_trim150_scaffold_1380_7
Pseudomonas mosselii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3998..4498)
DNA (501bp) protein (167aa)
Uncharacterized protein n=46 Tax=Proteobacteria RepID=A1W5L7_ACISJ rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AIN57428.1}; TaxID=1388763 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mosselii SJ10.;"
scnpilot_solids1_trim150_scaffold_1380_8
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4949..5695
DNA (747bp) protein (249aa)
Uncharacterized protein n=10 Tax=Proteobacteria RepID=A1W5L6_ACISJ rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ETU97050.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PS42.;"
scnpilot_solids1_trim150_scaffold_1380_9
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5814..6026
DNA (213bp) protein (71aa)
Phage transcriptional regulator, AlpA n=59 Tax=Proteobacteria RepID=A1W5L5_ACISJ
alpA; DNA-binding transcriptional activator; K07733 prophage regulatory protein
Phage-related protein {ECO:0000313|EMBL:EIK90794.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_solids1_trim150_scaffold_1380_10
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6069..6944
DNA (876bp) protein (292aa)
Cobyrinic acid a,c-diamide synthase n=11 Tax=Proteobacteria RepID=A1W5L4_ACISJ rbh
cobyrinic acid a,c-diamide synthase rbh
Uncharacterized protein {ECO:0000313|EMBL:ETU97048.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PS42.;"
scnpilot_solids1_trim150_scaffold_1380_11
Pseudomonas mosselii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6928..7197
DNA (270bp) protein (90aa)
Uncharacterized protein n=48 Tax=Proteobacteria RepID=A1W5L3_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIN57424.1}; TaxID=1388763 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mosselii SJ10.;"
scnpilot_solids1_trim150_scaffold_1380_12
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7190..8869
DNA (1680bp) protein (560aa)
Predicted transcriptional regulator n=3 Tax=Pseudomonas aeruginosa RepID=E2ZUF4_PSEAI rbh
Integrating conjugative element, PFGI_1 class, ParB family protein {ECO:0000313|EMBL:ETU97046.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PS42.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_1380_13
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8884..9444
DNA (561bp) protein (187aa)
COG0635: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases n=50 Tax=Proteobacteria RepID=B7V579_PSEA8 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EJO29616.1}; TaxID=1156919 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii HLE.;"
scnpilot_solids1_trim150_scaffold_1380_14
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9448..10680
DNA (1233bp) protein (411aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=U8RBX1_PSEAI rbh
Uncharacterized protein {ECO:0000313|EMBL:ETU97044.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PS42.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_1380_15
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11111..11905
DNA (795bp) protein (265aa)
Uncharacterized protein n=8 Tax=Proteobacteria RepID=J7DDC7_PSEAI rbh
transposon rbh
Integrating conjugative element protein {ECO:0000313|EMBL:ETU97043.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PS42.;"
scnpilot_solids1_trim150_scaffold_1380_16
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11902..12429
DNA (528bp) protein (176aa)
Uncharacterized protein n=4 Tax=Pseudomonas aeruginosa RepID=U9KWR1_PSEAI rbh
Uncharacterized protein {ECO:0000313|EMBL:ETU97042.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PS42.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_1380_17
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12503..12955
DNA (453bp) protein (151aa)
Single-stranded DNA-binding protein n=8 Tax=Proteobacteria RepID=A1W5K7_ACISJ rbh
single-stranded DNA-binding protein rbh
Single-stranded DNA-binding protein {ECO:0000256|PIRNR:PIRNR002070}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_solids1_trim150_scaffold_1380_18
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13232..14242
DNA (1011bp) protein (337aa)
DNA topoisomerase III (EC:5.99.1.2); K03169 DNA topoisomerase III [EC:5.99.1.2]
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
DNA topoisomerase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W5Y0_ACISJ
scnpilot_solids1_trim150_scaffold_1380_19
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14188..15153
DNA (966bp) protein (322aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PS42.;"
topB1; DNA topoisomerase III 1 (EC:5.99.1.2); K03169 DNA topoisomerase III [EC:5.99.1.2]
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BL03 RepID=U9KTT4_PSEAI
scnpilot_solids1_trim150_scaffold_1380_20
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15685..17295
DNA (1611bp) protein (537aa)
methyltransferase (EC:2.1.1.37); K00558 DNA (cytosine-5-)-methyltransferase [EC:2.1.1.37] rbh
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BL03 RepID=U9KTE3_PSEAI rbh
Uncharacterized protein {ECO:0000313|EMBL:ETU97039.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PS42.;"
scnpilot_solids1_trim150_scaffold_1380_21
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17539..18096
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BL03 RepID=U9L5K0_PSEAI rbh
Uncharacterized protein {ECO:0000313|EMBL:ETU97038.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PS42.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_1380_22
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18430..18651
DNA (222bp) protein (74aa)
Uncharacterized protein n=13 Tax=Proteobacteria RepID=A9IB61_BORPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAQ39231.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
Displaying 25 items

View Taxonomy