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scnpilot_solids1_trim150_scaffold_1405

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1405_1
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..336)
DNA (336bp) protein (112aa)
OsmC family protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TI20_TISMK
OsmC family protein
OsmC family protein {ECO:0000313|EMBL:AFK52408.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
scnpilot_solids1_trim150_scaffold_1405_2
unknown

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comp(596..808)
DNA (213bp) protein (71aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1405_3
unknown

Not on your lists

comp(1619..1828)
DNA (210bp) protein (70aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1405_4
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1833..3095
DNA (1263bp) protein (421aa)
hypothetical protein n=1 Tax=Methylocystis rosea RepID=UPI00036E6333 rbh
Phage integrase {ECO:0000313|EMBL:EDP64873.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
integrase family protein
scnpilot_solids1_trim150_scaffold_1405_5
unknown

Not on your lists

3605..3814
DNA (210bp) protein (70aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1405_6
unknown

Not on your lists

4281..4559
DNA (279bp) protein (93aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1405_7
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5157..5477
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI0003827677
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABY30823.1}; TaxID=419610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain PA1).;"
scnpilot_solids1_trim150_scaffold_1405_8
unknown

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comp(5444..5950)
DNA (507bp) protein (169aa)
YD repeat-containing protein
scnpilot_solids1_trim150_scaffold_1405_9
unknown

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6129..6434
DNA (306bp) protein (102aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1405_10
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6847..7251)
DNA (405bp) protein (135aa)
TadE family protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y7M4_9RHIZ
TadE family protein {ECO:0000313|EMBL:EHH12346.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
scnpilot_solids1_trim150_scaffold_1405_11
Asticcacaulis biprosthecium, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7253..7702)
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=Asticcacaulis biprosthecum C19 RepID=F4QTX4_9CAUL
Putative uncharacterized protein {ECO:0000313|EMBL:EGF89274.1}; TaxID=715226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis biprosthecum C19.;"
TadE family protein
scnpilot_solids1_trim150_scaffold_1405_12
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7707..8936)
DNA (1230bp) protein (410aa)
UPI0003CF82C7 related cluster n=1 Tax=unknown RepID=UPI0003CF82C7 rbh
Uncharacterized protein {ECO:0000313|EMBL:ESY66466.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_1405_13
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9175..9921)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J0A1_ACIMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ81461.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
scnpilot_solids1_trim150_scaffold_1405_14
Trichophyton tonsurans, Trichophyton, Onygenales, Eurotiomycetidae, Ascomycota, Fungi

Not on your lists

comp(10231..11073)
DNA (843bp) protein (281aa)
Putative uncharacterized protein n=1 Tax=Trichophyton tonsurans (strain CBS 112818) RepID=F2RNS9_TRIT1
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EGD92985.1}; TaxID=647933 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Onygenales; Arthrodermataceae; Trichophyton.;" source="Trichophyton tonsurans (strain CBS 112818) (Scalp ringworm fungus).;"
scnpilot_solids1_trim150_scaffold_1405_15
RLO_Sphingomonadales_63_15, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11203..11931)
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Caulobacter sp. JGI 0001013-O16 RepID=UPI000366508C
transmembrane transcriptional regulator (anti-sigma factor)
Tax=RIFCSPLOWO2_12_FULL_Sphingomonadales_63_15_curated
scnpilot_solids1_trim150_scaffold_1405_16
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11928..12440)
DNA (513bp) protein (171aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Novosphingobium sp. AP12 RepID=J2PMV3_9SPHN
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EJL28932.1}; Flags: Precursor;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;"
ECF subfamily RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
scnpilot_solids1_trim150_scaffold_1405_17
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12593..13393
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI0003795686
Uncharacterized protein {ECO:0000313|EMBL:KGM57034.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
peptidase S8/S53 subtilisin kexin sedolisin
Displaying 17 items

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