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scnpilot_solids1_trim150_scaffold_1414

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1414_1
unknown

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3..200
DNA (198bp) protein (66aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00035EA0C6
scnpilot_solids1_trim150_scaffold_1414_2
unknown

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286..558
DNA (273bp) protein (91aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1414_3
unknown

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648..857
DNA (210bp) protein (70aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1414_4
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2087..2992)
DNA (906bp) protein (302aa)
carbonate dehydratase (EC:4.2.1.1) rbh
Transcriptional regulator, LysR family n=1 Tax=Methylobacterium extorquens DSM 13060 RepID=H1KL33_METEX rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EHP91776.1}; Flags: Precursor;; TaxID=882800 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens DSM 13060.;"
scnpilot_solids1_trim150_scaffold_1414_5
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3142..4254
DNA (1113bp) protein (371aa)
NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Methylobacterium extorquens (strain CM4 / NCIMB 13688) RepID=B7KQA3_METC4 rbh
NADH:flavin oxidoreductase/NADH oxidase rbh
NADH:flavin oxidoreductase/NADH oxidase {ECO:0000313|EMBL:ACK82139.1}; TaxID=440085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain CM4 / NCIMB 13688); (Methylobacterium chloromethanicum).;"
scnpilot_solids1_trim150_scaffold_1414_6
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4834..5262
DNA (429bp) protein (143aa)
PAS protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GU85_PUSST
PAS protein
PAS protein {ECO:0000313|EMBL:AEC21054.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
scnpilot_solids1_trim150_scaffold_1414_7

Not on your lists

5467..6177
DNA (711bp) protein (237aa)
Oxidoreductase FAD/NAD(P)-binding protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B1Z1_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:KKM26749.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
oxidoreductase FAD/NAD(P)-binding protein rbh
scnpilot_solids1_trim150_scaffold_1414_8
unknown

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comp(6483..6608)
DNA (126bp) protein (42aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1414_9
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6693..7034
DNA (342bp) protein (114aa)
Putative uncharacterized protein n=1 Tax=Roseobacter sp. GAI101 RepID=B7RQ95_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KGE79946.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1414_10
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6973..7545
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GSZ5_PUSST
Uncharacterized protein {ECO:0000313|EMBL:CDM25973.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
hypothetical protein; K09943 hypothetical protein
scnpilot_solids1_trim150_scaffold_1414_11
Rhodomicrobium vannielii, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7702..8595)
DNA (894bp) protein (298aa)
Transcriptional regulator, LysR family n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I333_RHOVT rbh
LysR family transcriptional regulator rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADP70327.1}; TaxID=648757 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 /; LMG 4299).;"
scnpilot_solids1_trim150_scaffold_1414_12
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8681..9481
DNA (801bp) protein (267aa)
Bifunctional deaminase-reductase domain protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T3C9_ACIDE rbh
Bifunctional deaminase-reductase domain protein {ECO:0000313|EMBL:EER61041.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
5-amino-6-(5-phosphoribosylamino)uracil reductase
scnpilot_solids1_trim150_scaffold_1414_13
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9553..10542
DNA (990bp) protein (330aa)
Aldo/keto reductase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T3B9_ACIDE rbh
Aldo/keto reductase {ECO:0000313|EMBL:EER61031.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
aldo/keto reductase rbh
scnpilot_solids1_trim150_scaffold_1414_14
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10572..11312
DNA (741bp) protein (247aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UNH2_PSEUP
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AER55403.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
scnpilot_solids1_trim150_scaffold_1414_15
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11395..12537
DNA (1143bp) protein (381aa)
Carboxymuconolactone decarboxylase protein {ECO:0000313|EMBL:AJD40194.1}; EC=4.1.1.44 {ECO:0000313|EMBL:AJD40194.1};; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
carboxymuconolactone decarboxylase; K01607 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] rbh
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J3CBU8_9RHIZ rbh
scnpilot_solids1_trim150_scaffold_1414_16
unknown

Not on your lists

12954..13193
DNA (240bp) protein (80aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1414_17
unknown

Not on your lists

13198..13293
DNA (96bp) protein (32aa)

This feature has no annotations

Displaying 17 items

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