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scnpilot_solids1_trim150_scaffold_1420

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1420_1
unknown

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comp(1..222)
DNA (222bp) protein (74aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1420_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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242..700
DNA (459bp) protein (153aa)
Glycyl aminopeptidase n=1 Tax=Rhodanobacter denitrificans RepID=I4WQ03_9GAMM
glycyl aminopeptidase
Glycyl aminopeptidase {ECO:0000313|EMBL:AGG89604.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1420_3
unknown

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830..1411
DNA (582bp) protein (194aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1420_4
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1495..3168)
DNA (1674bp) protein (558aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632};; Imidazolonepropionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00577}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
urocanate hydratase (EC:4.2.1.49)
Urocanate hydratase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W010_9GAMM
scnpilot_solids1_trim150_scaffold_1420_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3334..5238)
DNA (1905bp) protein (635aa)
Histidine ammonia-lyase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKJ1_9GAMM
Histidine ammonia-lyase {ECO:0000313|EMBL:EIL99982.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
histidine ammonia-lyase
scnpilot_solids1_trim150_scaffold_1420_6
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5626..6240
DNA (615bp) protein (205aa)
GntR family transcriptional regulator n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI00035DFFCE
GntR family transcriptional regulator {ECO:0000313|EMBL:AJC47471.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
hutC; transcriptional regulator; K05836 GntR family transcriptional regulator, histidine utilization repressor
scnpilot_solids1_trim150_scaffold_1420_7
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6303..8936)
DNA (2634bp) protein (878aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0G626_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA99160.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1420_8
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(9077..9880)
DNA (804bp) protein (268aa)
Putative uncharacterized protein n=1 Tax=Mobilicoccus pelagius NBRC 104925 RepID=H5UVF1_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:KGN31444.1}; TaxID=1385520 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_1420_9

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comp(9972..13103)
DNA (3132bp) protein (1044aa)
Glycosyl hydrolase, BNR repeat-containing protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T1B506_9ZZZZ rbh
Glycosyl hydrolase, BNR repeat-containing protein {ECO:0000313|EMBL:EQD49310.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
BNR repeat-containing glycosyl hydrolase
scnpilot_solids1_trim150_scaffold_1420_10
unknown

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comp(13176..13244)
DNA (69bp) protein (23aa)

This feature has no annotations

Displaying 10 items

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