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scnpilot_solids1_trim150_scaffold_1423

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1423_1
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1..936
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SCG5_PEDSD
Cell envelope biogenesis protein AsmA {ECO:0000313|EMBL:KFF28947.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1423_2
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(948..1469)
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000381B690
Putative membrane protein {ECO:0000313|EMBL:CEA15765.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
CDP-alcohol phosphatidyltransferase
scnpilot_solids1_trim150_scaffold_1423_3
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1671..4610)
DNA (2940bp) protein (980aa)
Excinuclease ABC, A subunit n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PC31_CHIPD
excinuclease ABC subunit A; K03701 excinuclease ABC subunit A
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids1_trim150_scaffold_1423_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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4725..5996
DNA (1272bp) protein (424aa)
Uncharacterized protein n=3 Tax=Bacteroidetes RepID=F3XZ94_9FLAO rbh
CBS family protein rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_1423_5
unknown

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6120..7448
DNA (1329bp) protein (443aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1423_6
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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7516..8553
DNA (1038bp) protein (346aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacteriaceae bacterium AK24.;"
3-dehydroquinate synthase (EC:4.2.3.4); K01735 3-dehydroquinate synthase [EC:4.2.3.4]
3-dehydroquinate synthase n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZTD5_9BACT
scnpilot_solids1_trim150_scaffold_1423_7
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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8531..9754
DNA (1224bp) protein (408aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Pontibacter roseus RepID=UPI0003657564 rbh
EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) rbh
scnpilot_solids1_trim150_scaffold_1423_8
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(9760..11970)
DNA (2211bp) protein (737aa)
Uncharacterized protein n=1 Tax=Saprospira grandis (strain Lewin) RepID=H6L2Q0_SAPGL rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFC24807.1}; TaxID=984262 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Saprospira.;" source="Saprospira grandis (strain Lewin).;"
scnpilot_solids1_trim150_scaffold_1423_9
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(11977..12849)
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00037FE94F
Uncharacterized protein {ECO:0000313|EMBL:KGE88626.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
Outer membrane protein Omp28
scnpilot_solids1_trim150_scaffold_1423_10
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(12933..13235)
DNA (303bp) protein (101aa)
Murein lytic exotransglycosylase, GH23 family {ECO:0000313|EMBL:KGL63711.1}; EC=3.2.1.- {ECO:0000313|EMBL:KGL63711.1};; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel1_85.;"
Soluble lytic murein transglycosylase-like protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0APG8_IGNAJ
Soluble lytic murein transglycosylase-like protein
Displaying 10 items

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