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scnpilot_solids1_trim150_scaffold_1491

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1491_1
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..442)
DNA (441bp) protein (147aa)
Type IV secretion/conjugal transfer ATPase,VirB4 family n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FJ47_9RHIZ
Type VI secretion protein {ECO:0000313|EMBL:EZQ14589.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
conjugal transfer protein; K03199 type IV secretion system protein VirB4
scnpilot_solids1_trim150_scaffold_1491_2
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(439..732)
DNA (294bp) protein (98aa)
Putative Type IV secretion system protein B3 n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FJA8_9RHIZ
Type VI secretion protein {ECO:0000313|EMBL:EXL04871.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
scnpilot_solids1_trim150_scaffold_1491_3
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(737..1048)
DNA (312bp) protein (104aa)
UPI0003D015A5 related cluster n=1 Tax=unknown RepID=UPI0003D015A5
Conjugal transfer protein TrbC {ECO:0000313|EMBL:EXL04870.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
conjugal transfer protein trbc; K03197 type IV secretion system protein VirB2
scnpilot_solids1_trim150_scaffold_1491_4
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1064..1735)
DNA (672bp) protein (224aa)
UPI0003D00809 related cluster n=1 Tax=unknown RepID=UPI0003D00809
Lytic transglycosylase {ECO:0000313|EMBL:EZQ14586.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
lytic transglycosylase
scnpilot_solids1_trim150_scaffold_1491_5
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1837..2457
DNA (621bp) protein (207aa)
UPI0003CEB89F related cluster n=1 Tax=unknown RepID=UPI0003CEB89F
Uncharacterized protein {ECO:0000313|EMBL:EXL04953.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
scnpilot_solids1_trim150_scaffold_1491_6
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2444..2995
DNA (552bp) protein (184aa)
UPI0003D016F2 related cluster n=1 Tax=unknown RepID=UPI0003D016F2
Succinoglycan biosynthesis protein exoI {ECO:0000313|EMBL:EZQ14585.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
succinoglycan biosynthesis protein ExoI-like protein
scnpilot_solids1_trim150_scaffold_1491_7
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2992..3243
DNA (252bp) protein (84aa)
Uncharacterized protein {ECO:0000313|EMBL:EZQ14631.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
scnpilot_solids1_trim150_scaffold_1491_8
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3659..3970)
DNA (312bp) protein (104aa)
UPI0003D05F35 related cluster n=1 Tax=unknown RepID=UPI0003D05F35
Uncharacterized protein {ECO:0000313|EMBL:ESZ08427.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
scnpilot_solids1_trim150_scaffold_1491_9
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4433..4951)
DNA (519bp) protein (173aa)
Mll9232 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q981U3_RHILO
Uncharacterized protein {ECO:0000313|EMBL:EZQ14583.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1491_10
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5079..5678
DNA (600bp) protein (200aa)
UPI0003CF46FD related cluster n=1 Tax=unknown RepID=UPI0003CF46FD
Uncharacterized protein {ECO:0000313|EMBL:ESY78052.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1491_11
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6003..6431)
DNA (429bp) protein (143aa)
VapC ribonuclease R02377 (EC:3.1.-.-)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1401243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti RU11/001.;"
Ribonuclease VapC n=5 Tax=Rhizobium meliloti RepID=F6BMK6_SINMB
scnpilot_solids1_trim150_scaffold_1491_12
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6428..6679)
DNA (252bp) protein (84aa)
Protein transcription factor n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0G7N2_RHIML
Protein transcription factor {ECO:0000313|EMBL:EHK74672.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1491_13
unknown

Not on your lists

6833..7180
DNA (348bp) protein (116aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1491_14
unknown

Not on your lists

comp(7324..7449)
DNA (126bp) protein (42aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1491_15
unknown

Not on your lists

comp(7415..7606)
DNA (192bp) protein (64aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1491_16
unknown

Not on your lists

comp(7635..7820)
DNA (186bp) protein (62aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1491_17
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7986..8423)
DNA (438bp) protein (146aa)
UPI0003CE2275 related cluster n=1 Tax=unknown RepID=UPI0003CE2275
Uncharacterized protein {ECO:0000313|EMBL:EZQ14582.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
scnpilot_solids1_trim150_scaffold_1491_18
unknown

Not on your lists

comp(8428..8532)
DNA (105bp) protein (35aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1491_19
unknown

Not on your lists

comp(8893..9069)
DNA (177bp) protein (59aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1491_20
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9329..10309)
DNA (981bp) protein (327aa)
UPI0003CF6B60 related cluster n=1 Tax=unknown RepID=UPI0003CF6B60 rbh
Transposase IS110 {ECO:0000313|EMBL:ESY63168.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
transposase IS116/IS110/IS902 rbh
scnpilot_solids1_trim150_scaffold_1491_21
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10284..10442)
DNA (159bp) protein (53aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00035D9EC3
Transposase {ECO:0000313|EMBL:CDX52785.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
transposase y4qE
scnpilot_solids1_trim150_scaffold_1491_22

Not on your lists

10863..12392
DNA (1530bp) protein (510aa)
ISPsy20 transposase IstA n=1 Tax=uncultured bacterium RepID=C6KTX0_9BACT rbh
ISPsy20 transposase IstA {ECO:0000313|EMBL:BAH89418.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
transposase rbh
scnpilot_solids1_trim150_scaffold_1491_23
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12337..12708
DNA (372bp) protein (124aa)
ISPsy20 transposase IstB n=1 Tax=uncultured bacterium RepID=C6KTX1_9BACT
ATP-binding protein {ECO:0000313|EMBL:EZQ12556.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
istB-like ATP binding family protein 1
Displaying 23 items

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