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scnpilot_solids1_trim150_scaffold_1532

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1532_1
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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138..2378
DNA (2241bp) protein (747aa)
Uncharacterized protein n=1 Tax=Methylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM 25689 / JAM1) RepID=I1XJV8_METNJ rbh
Uncharacterized protein {ECO:0000313|EMBL:KJE45607.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas viridans.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_1532_2

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2375..3031
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Rhizobium gallicum RepID=UPI000380A4DA
Marine sediment metagenome DNA, contig: S06H3_S04272 {ECO:0000313|EMBL:GAI23749.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
scnpilot_solids1_trim150_scaffold_1532_3
unknown

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3028..4101
DNA (1074bp) protein (358aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1532_4
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4121..5464)
DNA (1344bp) protein (448aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WMJ0_9BURK rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHR73155.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
putative superfamily S-adenosyl-L-methionine-dependent methyltransferase
scnpilot_solids1_trim150_scaffold_1532_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5877..6164)
DNA (288bp) protein (96aa)
transcriptional regulator n=1 Tax=Thiobacillus denitrificans RepID=UPI0003671370
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_solids1_trim150_scaffold_1532_6
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6358..8298)
DNA (1941bp) protein (647aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000369DE09 rbh
hypothetical protein rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
scnpilot_solids1_trim150_scaffold_1532_7
unknown

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comp(8285..8620)
DNA (336bp) protein (112aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1532_8
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8617..9141)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003743BE1 rbh
Peptidase {ECO:0000313|EMBL:AJP47689.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
putative conjugal transfer TRAF transmembrane protein
scnpilot_solids1_trim150_scaffold_1532_9
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9138..9671)
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037C0AB2 rbh
Transposase {ECO:0000313|EMBL:AJP47690.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1532_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9668..9913)
DNA (246bp) protein (82aa)
parB partition protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037E0639
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_solids1_trim150_scaffold_1532_11
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9924..10565)
DNA (642bp) protein (214aa)
ParA n=1 Tax=Thiobacillus denitrificans RepID=UPI00036BC195 rbh
ATPase {ECO:0000313|EMBL:AJP47692.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
cobyrinic acid a,c-diamide synthase; K03496 chromosome partitioning protein
scnpilot_solids1_trim150_scaffold_1532_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10771..11652)
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036D8D51 rbh
putative replication initiator and transcription repressor protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_solids1_trim150_scaffold_1532_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11675..11974)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003680820
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_solids1_trim150_scaffold_1532_14
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12109..12489)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035F317D
Uncharacterized protein {ECO:0000313|EMBL:AJP47694.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
hypothetical protein
Displaying 14 items

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