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scnpilot_solids1_trim150_scaffold_1578

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1578_1
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..417)
DNA (417bp) protein (139aa)
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6ANX4_DELSC
RND transporter {ECO:0000313|EMBL:KEH08193.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
NodT family RND efflux system outer membrane lipoprotein
scnpilot_solids1_trim150_scaffold_1578_2
unknown

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comp(414..596)
DNA (183bp) protein (61aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1578_3
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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comp(593..763)
DNA (171bp) protein (57aa)
Putative type I restriction enzymeP M protein {ECO:0000313|EMBL:KFB76681.1}; EC=2.1.1.72 {ECO:0000313|EMBL:KFB76681.1};; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-02.;"
hsdM1; type I restriction-modification system DNA methylase (EC:2.1.1.72); K03427 type I restriction enzyme M protein [EC:2.1.1.72]
Type I restriction-modification system DNA methylase n=1 Tax=Propionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 / CIP 103027 / CIRM-BIA1) RepID=D7GHS2_PROFC
scnpilot_solids1_trim150_scaffold_1578_4
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(831..1340)
DNA (510bp) protein (170aa)
GCN5-like N-acetyltransferase n=1 Tax=Acidithiobacillus caldus (strain SM-1) RepID=F9ZUR6_ACICS
Putative acetyltransferase {ECO:0000313|EMBL:KFB76680.1}; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-02.;"
GCN5-like N-acetyltransferase
scnpilot_solids1_trim150_scaffold_1578_5
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1309..1620)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Acidithiobacillus caldus (strain SM-1) RepID=F9ZUR5_ACICS
Uncharacterized protein {ECO:0000313|EMBL:KFB76679.1}; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-02.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1578_6
Ralstonia syzygii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1951..2451)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Ralstonia syzygii R24 RepID=G3A2B1_9RALS
Uncharacterized protein {ECO:0000313|EMBL:CCA85543.1}; TaxID=907261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia syzygii R24.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1578_7
Ralstonia syzygii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2454..3047)
DNA (594bp) protein (198aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|SAAS:SAAS00029421}; EC=6.3.4.20 {ECO:0000256|SAAS:SAAS00029421};; TaxID=907261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia syzygii R24.;"
Putative queuosine biosynthesis protein queC n=1 Tax=Ralstonia syzygii R24 RepID=G3A2B2_9RALS rbh
ExsB family protein; K06920 queuosine biosynthesis protein QueC
scnpilot_solids1_trim150_scaffold_1578_8
Ralstonia syzygii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3044..3757)
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Brachymonas chironomi RepID=UPI0003635CCD rbh
Uncharacterized protein {ECO:0000313|EMBL:CCA85545.1}; TaxID=907261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia syzygii R24.;"
HhH-GPD family protein
scnpilot_solids1_trim150_scaffold_1578_9
Ralstonia syzygii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3754..4734)
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Brachymonas chironomi RepID=UPI00038273AF rbh
Uncharacterized protein {ECO:0000313|EMBL:CCA85546.1}; TaxID=907261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia syzygii R24.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1578_10
Ralstonia syzygii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4731..5225)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Ralstonia syzygii R24 RepID=G3A2B4_9RALS
Uncharacterized protein {ECO:0000313|EMBL:CCA85547.1}; TaxID=907261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia syzygii R24.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1578_11
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5239..6378)
DNA (1140bp) protein (380aa)
Restriction endonuclease S subunits-like protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LLA9_9BURK rbh
Restriction endonuclease S subunits-like protein {ECO:0000313|EMBL:EGJ09127.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
restriction endonuclease S subunits-like protein
scnpilot_solids1_trim150_scaffold_1578_12
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6375..7568)
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Methylococcus capsulatus RepID=UPI0002E27C27 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACV36396.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
scnpilot_solids1_trim150_scaffold_1578_13
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7565..9394)
DNA (1830bp) protein (610aa)
N-6 DNA methylase; K03427 type I restriction enzyme M protein [EC:2.1.1.72] rbh
SAM-dependent methyltransferase n=1 Tax=Acidovorax avenae RepID=UPI0003030F7D rbh
Type I restriction-modification system methyltransferase subunit {ECO:0000313|EMBL:GAD20369.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
scnpilot_solids1_trim150_scaffold_1578_14
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9410..11818)
DNA (2409bp) protein (803aa)
EcoEI R domain-containing protein; K01153 type I restriction enzyme, R subunit [EC:3.1.21.3] rbh
DEAD/DEAH box helicase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035FA7DA rbh
Type I site-specific restriction-modification system {ECO:0000313|EMBL:GAD20370.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
scnpilot_solids1_trim150_scaffold_1578_trna_2
unknown

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comp(12183..12255)
DNA (73bp)
transferRNA Ala
scnpilot_solids1_trim150_scaffold_1578_15
unknown

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12819..13016
DNA (198bp) protein (66aa)
id=12497434 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
scnpilot_solids1_trim150_scaffold_1578_16
BJP_08E140C01_10KDA_Methylophilales_47_88, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13325..14380
DNA (1056bp) protein (352aa)
replication initiation factor id=12497433 bin=THIO_MID species=Methylosarcina fibrata genus=Methylosarcina taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
replication initiation factor
Tax=BJP_08E140C01_10KDA_Methylophilales_47_88
scnpilot_solids1_trim150_scaffold_1578_17
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14577..15599
DNA (1023bp) protein (341aa)
Phage integrase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47H88_DECAR rbh
Phage integrase rbh
Phage integrase {ECO:0000313|EMBL:AAZ45793.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
scnpilot_solids1_trim150_scaffold_1578_trna_1
unknown

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comp(15637..15710)
DNA (74bp)
transferRNA Met
scnpilot_solids1_trim150_scaffold_1578_18
unknown

Not on your lists

comp(15813..15887)
DNA (75bp) protein (25aa)

This feature has no annotations

Displaying 20 items

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