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scnpilot_solids1_trim150_scaffold_1582

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1582_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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75..2060
DNA (1986bp) protein (662aa)
High-affinity Fe2+/Pb2+ permease n=1 Tax=Rhodanobacter denitrificans RepID=M4NFP0_9GAMM rbh
High-affinity Fe2+/Pb2+ permease {ECO:0000313|EMBL:AGG88872.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
high-affinity Fe2+/Pb2+ permease rbh
scnpilot_solids1_trim150_scaffold_1582_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2073..2702
DNA (630bp) protein (210aa)
RND OM export protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNZ9_9GAMM rbh
RND OM export protein {ECO:0000313|EMBL:EIM01191.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Co/Zn/Cd efflux system component
scnpilot_solids1_trim150_scaffold_1582_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2699..3286
DNA (588bp) protein (196aa)
Transporter n=1 Tax=Rhodanobacter denitrificans RepID=I4WWK6_9GAMM
PAP2 superfamily protein
PAP2 superfamily protein {ECO:0000313|EMBL:AGG88870.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1582_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3317..4282)
DNA (966bp) protein (322aa)
Cation diffusion facilitator family transporter n=1 Tax=Rhodanobacter denitrificans RepID=M4NDQ5_9GAMM
cation diffusion facilitator family transporter
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:AGG88869.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1582_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4375..4698)
DNA (324bp) protein (108aa)
Nitrogen regulatory protein PII n=1 Tax=Rhodanobacter denitrificans RepID=M4NGT7_9GAMM
nitrogen regulatory protein PII
Nitrogen regulatory protein PII {ECO:0000313|EMBL:AGG88868.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1582_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4695..5585)
DNA (891bp) protein (297aa)
Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA n=1 Tax=Rhodanobacter denitrificans RepID=I4WWL1_9GAMM
Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA {ECO:0000313|EMBL:EIM01207.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
heavy metal efflux pump, cobalt-zinc-cadmium
scnpilot_solids1_trim150_scaffold_1582_7
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5656..6882
DNA (1227bp) protein (409aa)
Transposase mutator family protein (Fragment) n=1 Tax=Rhodanobacter denitrificans RepID=I4WL71_9GAMM rbh
transposase mutator family protein; K07493 putative transposase rbh
Putative transposase {ECO:0000313|EMBL:ABD36387.1}; TaxID=317013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. phaseoli.;"
scnpilot_solids1_trim150_scaffold_1582_8
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7435..8529)
DNA (1095bp) protein (365aa)
Copper resistance protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WGI1_9GAMM rbh
Copper resistance protein {ECO:0000313|EMBL:EIL98572.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Copper resistance protein B
scnpilot_solids1_trim150_scaffold_1582_9
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8541..10316)
DNA (1776bp) protein (592aa)
Copper-resistance protein, CopA family protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VRW6_9GAMM
Copper resistance protein CopA {ECO:0000313|EMBL:AHX13411.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
copper-resistance protein, CopA family
scnpilot_solids1_trim150_scaffold_1582_10
unknown

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comp(10422..10694)
DNA (273bp) protein (91aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1582_11
Thiorhodococcus drewsii, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10720..11664)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BL12 RepID=U9HN49_PSEAI rbh
Integrase catalytic region {ECO:0000313|EMBL:EGV33771.1}; TaxID=765913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus drewsii AZ1.;"
integrase catalytic subunit; K07497 putative transposase
scnpilot_solids1_trim150_scaffold_1582_12
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11661..11948)
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00037EBB16
transposase IS3/IS911 family protein
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:ACV33561.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
scnpilot_solids1_trim150_scaffold_1582_13

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comp(12005..12232)
DNA (228bp) protein (76aa)
Phage integrase family protein n=4 Tax=mine drainage metagenome RepID=T0Y1N3_9ZZZZ
Integrase family protein {ECO:0000313|EMBL:EQD45010.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
site-specific recombinase XerD
Displaying 13 items

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