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scnpilot_solids1_trim150_scaffold_1584

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1584_1
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..369
DNA (369bp) protein (123aa)
FUPA27 P-type ATPase n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MJT2_9SPHN
FUPA27 P-type ATPase {ECO:0000313|EMBL:CCW17019.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
heavy metal translocating P-type ATPase
scnpilot_solids1_trim150_scaffold_1584_2
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

366..518
DNA (153bp) protein (51aa)
Type cbb3 cytochrome oxidase biogenesis protein CcoS, involved in heme b insertion n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MNG0_9SPHN
Type cbb3 cytochrome oxidase biogenesis protein CcoS, involved in heme b insertion {ECO:0000313|EMBL:CCW17018.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
cbb3-type cytochrome oxidase maturation protein
scnpilot_solids1_trim150_scaffold_1584_trna_2
unknown

Not on your lists

comp(791..862)
DNA (72bp)
transferRNA Gln
scnpilot_solids1_trim150_scaffold_1584_3
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(950..1573)
DNA (624bp) protein (208aa)
Putative Glutathione transferase {ECO:0000313|EMBL:CCE10164.1}; EC=2.5.1.18 {ECO:0000313|EMBL:CCE10164.1};; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
Putative Glutathione transferase n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TUM6_9BRAD
glutathione transferase
scnpilot_solids1_trim150_scaffold_1584_trna_1
unknown

Not on your lists

1675..1748
DNA (74bp)
transferRNA Pro
scnpilot_solids1_trim150_scaffold_1584_4
Xylella fastidiosa, Xylella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1769..2950)
DNA (1182bp) protein (394aa)
Phage-related integrase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WW69_9BRAD
Integrase {ECO:0000313|EMBL:AIC11222.1}; TaxID=155920 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xylella.;" source="Xylella fastidiosa subsp. sandyi Ann-1.;"
phage-related integrase
scnpilot_solids1_trim150_scaffold_1584_5
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3171..3566)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7Q491_METSZ
Uncharacterized protein {ECO:0000313|EMBL:KFL26999.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1584_6

Not on your lists

comp(3646..4191)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BL12 RepID=U9I1U5_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:KKL64473.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1584_7
unknown

Not on your lists

comp(4219..4410)
DNA (192bp) protein (64aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1584_8
unknown

Not on your lists

comp(4407..4619)
DNA (213bp) protein (71aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1584_9
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4619..5140)
DNA (522bp) protein (174aa)
LexA repressor n=1 Tax=Oceanicaulis sp. HTCC2633 RepID=A3UKR4_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:AJA07410.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
scnpilot_solids1_trim150_scaffold_1584_10
unknown

Not on your lists

comp(5100..5330)
DNA (231bp) protein (77aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1584_11
unknown

Not on your lists

comp(5384..5530)
DNA (147bp) protein (49aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1584_12
unknown

Not on your lists

comp(5612..5902)
DNA (291bp) protein (97aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1584_13
unknown

Not on your lists

comp(5902..6102)
DNA (201bp) protein (67aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1584_14
Synergistes jonesii, Synergistes, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(6099..6404)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QSB8_BREDI
Uncharacterized protein {ECO:0000313|EMBL:KEJ91707.1}; TaxID=2754 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Synergistes.;" source="Synergistes jonesii.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1584_15
unknown

Not on your lists

comp(6401..6613)
DNA (213bp) protein (71aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1584_16

Not on your lists

comp(6610..7014)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Mycobacterium abscessus M94 RepID=I0PUT6_MYCAB
Uncharacterized protein {ECO:0000313|EMBL:KKM87224.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
scnpilot_solids1_trim150_scaffold_1584_17
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7016..7357)
DNA (342bp) protein (114aa)
HNH nuclease n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FSB3_9RHOB
HNH nuclease {ECO:0000313|EMBL:EDM71079.1}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. AzwK-3b.;"
HNH nuclease
scnpilot_solids1_trim150_scaffold_1584_18

Not on your lists

comp(7354..7782)
DNA (429bp) protein (143aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN77932.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
scnpilot_solids1_trim150_scaffold_1584_19
unknown

Not on your lists

comp(7782..8033)
DNA (252bp) protein (84aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1584_20
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8041..8724)
DNA (684bp) protein (228aa)
recombinase n=1 Tax=Sphingobium sp. YL23 RepID=UPI00039A66B2
Rad52/22 double-strand break repair protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
scnpilot_solids1_trim150_scaffold_1584_21
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8721..9461)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2Z6N3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EME69970.1}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1584_22
unknown

Not on your lists

comp(9461..9625)
DNA (165bp) protein (55aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1584_23
unknown

Not on your lists

comp(9622..9882)
DNA (261bp) protein (87aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1584_24
Sinorhizobium phage PBC5, Caudovirales, Viruses

Not on your lists

comp(9895..10200)
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Rhizobium meliloti RepID=UPI0002FC73D1
Putative uncharacterized protein orf70 {ECO:0000313|EMBL:AAL49646.1}; TaxID=179237 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales.;" source="Sinorhizobium phage PBC5.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1584_25
unknown

Not on your lists

comp(10200..10310)
DNA (111bp) protein (37aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1584_26
unknown

Not on your lists

comp(10307..10537)
DNA (231bp) protein (77aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1584_27
unknown

Not on your lists

comp(10537..10701)
DNA (165bp) protein (55aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1584_28
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10698..11123)
DNA (426bp) protein (142aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC65270.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Displaying items 1-30 of 49 in total

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