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scnpilot_solids1_trim150_scaffold_1680

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1680_1
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..303
DNA (303bp) protein (101aa)
Alpha/beta hydrolase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WAA8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KGB53216.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
alpha/beta hydrolase
scnpilot_solids1_trim150_scaffold_1680_2
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(406..1458)
DNA (1053bp) protein (351aa)
vitamin-B12 independent methionine synthase; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
Vitamin-B12 independent methionine synthase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VYQ6_9SPHN
Vitamin-B12 independent methionine synthase {ECO:0000313|EMBL:AJA08140.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
scnpilot_solids1_trim150_scaffold_1680_3
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1543..3108
DNA (1566bp) protein (522aa)
AMP-dependent synthetase and ligase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W9J5_9SPHN rbh
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ENY80388.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
AMP-dependent synthetase and ligase rbh
scnpilot_solids1_trim150_scaffold_1680_4
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3574..4212)
DNA (639bp) protein (213aa)
Fumarylacetoacetase {ECO:0000313|EMBL:GAO55031.1}; EC=3.7.1.2 {ECO:0000313|EMBL:GAO55031.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPM3_9SPHN rbh
glyoxalase/bleomycin resistance protein/dioxygenase
scnpilot_solids1_trim150_scaffold_1680_5
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4243..4860)
DNA (618bp) protein (206aa)
Glutathione S-transferase domain-containing protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPX5_9SPHN
Glutathione S-transferase domain-containing protein {ECO:0000313|EMBL:ENY80399.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
glutathione S-transferase domain-containing protein
scnpilot_solids1_trim150_scaffold_1680_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4958..5605)
DNA (648bp) protein (216aa)
Transposase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VYR4_9SPHN
Alkylhydroperoxidase ahpD core domain {ECO:0000313|EMBL:GAO55034.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
transposase rbh
scnpilot_solids1_trim150_scaffold_1680_7
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5616..6011)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WAB7_9SPHN
Cytosolic protein {ECO:0000313|EMBL:KGB58662.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1680_8
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6044..7363)
DNA (1320bp) protein (440aa)
Major facilitator superfamily protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPX0_9SPHN rbh
Major facilitator superfamily protein {ECO:0000313|EMBL:ENY80394.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
major facilitator transporter rbh
scnpilot_solids1_trim150_scaffold_1680_9
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7470..8240
DNA (771bp) protein (257aa)
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:GAO55038.1}; EC=1.1.1.100 {ECO:0000313|EMBL:GAO55038.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Short-chain dehydrogenase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W9J9_9SPHN
short-chain dehydrogenase
scnpilot_solids1_trim150_scaffold_1680_10
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8393..10588)
DNA (2196bp) protein (732aa)
TonB-dependent receptor n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPL3_9SPHN rbh
TonB-dependent receptor {ECO:0000313|EMBL:ENY80390.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
TonB-dependent receptor
scnpilot_solids1_trim150_scaffold_1680_11
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10708..11211
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPW4_9SPHN
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
scnpilot_solids1_trim150_scaffold_1680_12
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11398..11700)
DNA (303bp) protein (101aa)
succinyl-CoA:(R)-citramalate CoA-transferase (EC:2.8.3.-); K07749 formyl-CoA transferase [EC:2.8.3.16]
Succinyl-CoA:(R)-citramalate CoA-transferase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WHQ2_9SPHN
Succinyl-CoA:(R)-citramalate CoA-transferase {ECO:0000313|EMBL:ENY83001.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
Displaying 12 items

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