ggKbase home page

scnpilot_solids1_trim150_scaffold_1735

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1735_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..3547)
DNA (3546bp) protein (1182aa)
ATP-dependent helicase HrpA n=1 Tax=Rhodanobacter denitrificans RepID=M4NJG2_9GAMM
ATP-dependent helicase HrpA
ATP-dependent helicase HrpA {ECO:0000313|EMBL:AGG90242.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1735_2
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3638..5758
DNA (2121bp) protein (707aa)
Putative metalloendopeptidase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WC77_9GAMM
Putative metalloendopeptidase {ECO:0000313|EMBL:EIL97068.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
putative metalloendopeptidase
scnpilot_solids1_trim150_scaffold_1735_3
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6010..6606
DNA (597bp) protein (199aa)
Putative outer membrane protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWB4_9GAMM
Membrane protein {ECO:0000313|EMBL:KGI78438.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
putative outer membrane protein
scnpilot_solids1_trim150_scaffold_1735_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6742..7245
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4N3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94424.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1735_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7300..8064)
DNA (765bp) protein (255aa)
two-component system response regulator protein; K02477 two-component system, LytT family, response regulator
lytT; sensory transduction protein lytT; K02477 two-component system, LytT family, response regulator id=24658805 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Sensory transduction protein lytT {ECO:0000313|EMBL:CBH25993.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain M8).;"
scnpilot_solids1_trim150_scaffold_1735_6
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8061..9185)
DNA (1125bp) protein (375aa)
Putative regulator of cell autolysis n=1 Tax=Caulobacter sp. AP07 RepID=J3AQ46_9CAUL
signal transduction histidine kinase LytS
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
scnpilot_solids1_trim150_scaffold_1735_7
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9731..10618
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037719B3
Uncharacterized protein {ECO:0000313|EMBL:GAN45978.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
AraC family transcriptional regulator; K07506 AraC family transcriptional regulator
scnpilot_solids1_trim150_scaffold_1735_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10766..11332
DNA (567bp) protein (189aa)
TonB-denpendent receptor n=1 Tax=Dyella ginsengisoli RepID=UPI00034CF46D
outer membrane cobalamin receptor protein
Outer membrane cobalamin receptor protein {ECO:0000313|EMBL:AGG90558.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 8 items

View Taxonomy