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scnpilot_solids1_trim150_scaffold_1738

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1738_1
unknown

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2..67
DNA (66bp) protein (22aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1738_2
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(42..644)
DNA (603bp) protein (201aa)
Recombination protein RecR n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=RECR_AMOA5 rbh
recR; recombination protein RecR; K06187 recombination protein RecR rbh
Recombination protein RecR {ECO:0000255|HAMAP-Rule:MF_00017}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids1_trim150_scaffold_1738_trna_1
unknown

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939..1012
DNA (74bp)
transferRNA Ile
scnpilot_solids1_trim150_scaffold_1738_3
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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1184..1918
DNA (735bp) protein (245aa)
Probable transcriptional regulatory protein Aasi_0624 n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=Y624_AMOA5 rbh
hypothetical protein rbh
Probable transcriptional regulatory protein Aasi_0624 {ECO:0000255|HAMAP-Rule:MF_00693}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids1_trim150_scaffold_1738_4
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2397..2762
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ES19_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE06021.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids1_trim150_scaffold_1738_5
Moumouvirus, Viruses

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2993..3517
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Acanthamoeba polyphaga moumouvirus RepID=L7RE53_9VIRU
Uncharacterized protein {ECO:0000313|EMBL:AGC02413.1}; TaxID=1269028 species="Viruses; dsDNA viruses, no RNA stage; Mimiviridae; unclassified Mimiviridae.;" source="Acanthamoeba polyphaga moumouvirus.;"
scnpilot_solids1_trim150_scaffold_1738_6
Columba livia, Columba, Columbiformes, Aves, Chordata, Metazoa

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3822..4640
DNA (819bp) protein (273aa)
Reticulocyte-binding protein 2 like protein a n=1 Tax=Columba livia RepID=R7VV60_COLLI
Reticulocyte-binding protein 2 like protein a {ECO:0000313|EMBL:EMC81591.1}; TaxID=8932 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Columba.;" source="Columba livia (Rock dove).;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1738_7
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(6372..7451)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ES18_AMOA5
hypothetical protein; K07027
Uncharacterized protein {ECO:0000313|EMBL:ACE06020.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids1_trim150_scaffold_1738_8
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(7463..7768)
DNA (306bp) protein (102aa)
hypothetical protein; K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ES17_AMOA5
scnpilot_solids1_trim150_scaffold_1738_9
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8299..9381
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EST1_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE06283.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
scnpilot_solids1_trim150_scaffold_1738_10
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

10124..10780
DNA (657bp) protein (219aa)
hypothetical protein; K10773 endonuclease III [EC:4.2.99.18]
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
Endonuclease III n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ES16_AMOA5
scnpilot_solids1_trim150_scaffold_1738_11
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10798..11322)
DNA (525bp) protein (175aa)
hypothetical protein; K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16]
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
Cysteine--tRNA ligase n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ES15_AMOA5
Displaying 12 items

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