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scnpilot_solids1_trim150_scaffold_1864

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1864_trna_1
unknown

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12..84
DNA (73bp)
transferRNA Thr
scnpilot_solids1_trim150_scaffold_1864_1
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(58..1740)
DNA (1683bp) protein (561aa)
Resolvase domain-containing protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S3Y3_9SPHN rbh
resolvase domain-containing protein rbh
Resolvase domain-containing protein {ECO:0000313|EMBL:AGH50456.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
scnpilot_solids1_trim150_scaffold_1864_2
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1737..2255)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IJ99_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS68092.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
scnpilot_solids1_trim150_scaffold_1864_3
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2258..2563)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HUC3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB02880.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1864_4
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2645..2908)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S369_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH50455.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
scnpilot_solids1_trim150_scaffold_1864_5
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3052..3333
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GSE9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB02878.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1864_6
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3656..3955
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VCK5_SPHWW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ70021.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
scnpilot_solids1_trim150_scaffold_1864_7
unknown

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4456..4632
DNA (177bp) protein (59aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1864_8
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4992..5663
DNA (672bp) protein (224aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
DNA-methyltransferase n=1 Tax=Sphingobium baderi LL03 RepID=T0HUC0_9SPHN rbh
DNA methylase N-4/N-6 domain-containing protein rbh
scnpilot_solids1_trim150_scaffold_1864_9
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5732..6040
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1AY94_PARDP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL68238.1}; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus denitrificans (strain Pd 1222).;"
scnpilot_solids1_trim150_scaffold_1864_10
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6539..6805
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GGU4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB02956.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1864_11
unknown

Not on your lists

6961..7161
DNA (201bp) protein (67aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1864_12
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7178..7726
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HUH6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB02955.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1864_13
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7856..8122
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HZK7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB02954.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1864_14
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8119..9000
DNA (882bp) protein (294aa)
RepA replication protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GSL6_9SPHN rbh
RepA replication protein {ECO:0000313|EMBL:EQB02953.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
putative replication protein A rbh
scnpilot_solids1_trim150_scaffold_1864_15
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9305..10453
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GGS4_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB02931.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1864_16
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10450..10599
DNA (150bp) protein (50aa)
C-5 cytosine-specific DNA methylase; K00558 DNA (cytosine-5-)-methyltransferase [EC:2.1.1.37]
Cytosine-specific methyltransferase n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZFW1_GLUDA
Uncharacterized protein {ECO:0000313|EMBL:EZQ17751.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
Displaying 17 items

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