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scnpilot_solids1_trim150_scaffold_1880

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1880_1
Xanthomonas euvesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..1026)
DNA (1026bp) protein (342aa)
Tn5044 transposase n=1 Tax=Xanthomonas campestris pv. vesicatoria (strain 85-10) RepID=Q3BZY9_XANC5
Tn5044 transposase
Tn5044 transposase {ECO:0000313|EMBL:CAJ19927.1}; TaxID=316273 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. vesicatoria (strain 85-10).;"
scnpilot_solids1_trim150_scaffold_1880_2
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1069..2121)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TU75_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV00480.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scnpilot_solids1_trim150_scaffold_1880_3
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2175..3182)
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00037BDA59 rbh
Membrane protein {ECO:0000313|EMBL:KGE09333.1}; TaxID=28095 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (Pseudomonas marginata) (Phytomonas marginata).;"
putative Ca2+/Na+ antiporter; K07301 inner membrane protein rbh
scnpilot_solids1_trim150_scaffold_1880_4
unknown

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3609..3848
DNA (240bp) protein (80aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1880_5
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4127..5083
DNA (957bp) protein (319aa)
Putative cation transporter n=1 Tax=Rhodanobacter sp. 115 RepID=I4WEE0_9GAMM
Putative cation transporter {ECO:0000313|EMBL:EIL97831.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
cation diffusion facilitator family transporter
scnpilot_solids1_trim150_scaffold_1880_6
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5219..5578
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WM47_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM00539.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
scnpilot_solids1_trim150_scaffold_1880_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5650..6948
DNA (1299bp) protein (433aa)
Outer membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NDM3_9GAMM
outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:AGG88865.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1880_8
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6945..8045
DNA (1101bp) protein (367aa)
Co/Zn/Cd efflux system membrane fusion protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VT05_9GAMM
Co/Zn/Cd efflux system membrane fusion protein {ECO:0000313|EMBL:EIL90346.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
RND family efflux transporter, MFP subunit
scnpilot_solids1_trim150_scaffold_1880_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8045..11140
DNA (3096bp) protein (1032aa)
Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA n=1 Tax=Rhodanobacter denitrificans RepID=I4WWL1_9GAMM
Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA {ECO:0000313|EMBL:EIM01207.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
heavy metal efflux pump, cobalt-zinc-cadmium
scnpilot_solids1_trim150_scaffold_1880_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11137..11466
DNA (330bp) protein (110aa)
Nitrogen regulatory protein PII n=1 Tax=Rhodanobacter denitrificans RepID=M4NGT7_9GAMM
nitrogen regulatory protein PII
Nitrogen regulatory protein PII {ECO:0000313|EMBL:AGG88868.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1880_11
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11668..12219
DNA (552bp) protein (184aa)
Cation diffusion facilitator n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VT09_9GAMM
Cation diffusion facilitator {ECO:0000313|EMBL:EIL90350.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
czcD1; Co/Zn/Cd efflux system component
scnpilot_solids1_trim150_scaffold_1880_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12219..13124
DNA (906bp) protein (302aa)
Putative cation efflux protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP21_9GAMM
Putative cation efflux protein {ECO:0000313|EMBL:EIM01213.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative cation efflux protein; K03295 cation efflux system protein, CDF family
scnpilot_solids1_trim150_scaffold_1880_13
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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13387..14235
DNA (849bp) protein (283aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK84_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI08281.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids1_trim150_scaffold_1880_14
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14433..14876)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWK4_9GAMM
Mercuric resistance operon regulatory protein {ECO:0000313|EMBL:EXI77100.1}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1880_15
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14966..17365
DNA (2400bp) protein (800aa)
pbrA; Pb(II) resistance ATPase PbrA; K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5] rbh
P-type ATPase involved in Pb(II) resistance PbrA n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q58AJ6_RALME rbh
P-type ATPase involved in Pb(II) resistance PbrA {ECO:0000313|EMBL:ABF12806.1}; Pb-efflux ATPase {ECO:0000313|EMBL:CAI11271.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;"
scnpilot_solids1_trim150_scaffold_1880_16
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17469..17756
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0ACM7_COLFT
hypothetical protein; K09981 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK62901.1}; TaxID=1005048 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivorans (strain Ter331).;"
scnpilot_solids1_trim150_scaffold_1880_17
Ralstonia mannitolilytica, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17753..18280
DNA (528bp) protein (176aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=105219 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia mannitolilytica.;"
signal peptidase II (EC:3.4.23.36); K03101 signal peptidase II [EC:3.4.23.36]
Lipoprotein signal peptidase n=2 Tax=Ralstonia RepID=E2SSG3_9RALS
scnpilot_solids1_trim150_scaffold_1880_18
Calothrix parietina, Calothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

18409..18603
DNA (195bp) protein (65aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI000360D790
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ00912.1}; TaxID=1170562 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 6303.;"
Displaying 18 items

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