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scnpilot_solids1_trim150_scaffold_1914

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1914_1
unknown

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2..100
DNA (99bp) protein (33aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1914_2
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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233..682
DNA (450bp) protein (150aa)
UPI0003D0234D related cluster n=1 Tax=unknown RepID=UPI0003D0234D
Universal stress protein UspA {ECO:0000313|EMBL:EZQ13290.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
universal stress protein
scnpilot_solids1_trim150_scaffold_1914_3
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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710..1057
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036A608A
Putative membrane protein {ECO:0000313|EMBL:CDM60272.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
putative transmembrane protein
scnpilot_solids1_trim150_scaffold_1914_4
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1094..2059)
DNA (966bp) protein (322aa)
Agmatinase {ECO:0000313|EMBL:ESR24857.1}; EC=3.5.3.11 {ECO:0000313|EMBL:ESR24857.1};; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
agmatinase (EC:3.5.3.11); K01480 agmatinase [EC:3.5.3.11] rbh
agmatinase n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003721D8F rbh
scnpilot_solids1_trim150_scaffold_1914_5
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2095..2733)
DNA (639bp) protein (213aa)
Regulatory protein TetR n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TLF3_MESCW
TetR family transcriptional regulator
Regulatory protein TetR {ECO:0000313|EMBL:ADV12704.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
scnpilot_solids1_trim150_scaffold_1914_6
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2820..3893
DNA (1074bp) protein (358aa)
UPI0003CE902E related cluster n=1 Tax=unknown RepID=UPI0003CE902E rbh
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:CDX36781.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
family 1 extracellular solute-binding protein rbh
scnpilot_solids1_trim150_scaffold_1914_7
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4147..4980
DNA (834bp) protein (278aa)
UPI0003CF8DF9 related cluster n=1 Tax=unknown RepID=UPI0003CF8DF9 rbh
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:ESW77410.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
binding-protein-dependent transport systems inner membrane component rbh
scnpilot_solids1_trim150_scaffold_1914_8
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4985..5773
DNA (789bp) protein (263aa)
ABC transporter permease n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FRS2_9RHIZ
ABC transporter permease {ECO:0000313|EMBL:ESX82145.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
ABC transporter permease; K02053 putative spermidine/putrescine transport system permease protein
scnpilot_solids1_trim150_scaffold_1914_9
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5770..6831
DNA (1062bp) protein (354aa)
UPI0003CF249F related cluster n=1 Tax=unknown RepID=UPI0003CF249F rbh
Spermidine/putrescine ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESY69664.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
ABC transporter rbh
scnpilot_solids1_trim150_scaffold_1914_10
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6837..7547
DNA (711bp) protein (237aa)
UPI0003CF314D related cluster n=1 Tax=unknown RepID=UPI0003CF314D rbh
Beta-lactamase {ECO:0000313|EMBL:ESY72560.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
Zn-dependent hydrolase, glyoxylase rbh
scnpilot_solids1_trim150_scaffold_1914_11
Haematobacter missouriensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7591..8922)
DNA (1332bp) protein (444aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037F4CC0 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFI33368.1}; TaxID=366616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter missouriensis.;"
virulence factor family protein rbh
scnpilot_solids1_trim150_scaffold_1914_12
Haematobacter missouriensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8919..10310)
DNA (1392bp) protein (464aa)
hypothetical protein; K14205 phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036FE230 rbh
Lysylphosphatidylglycerol synthetase {ECO:0000313|EMBL:KFI33369.1}; TaxID=366616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter missouriensis.;"
Displaying 12 items

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