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scnpilot_solids1_trim150_scaffold_1940

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1940_1
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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2..289
DNA (288bp) protein (96aa)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13); K01494 dCTP deaminase [EC:3.5.4.13]
Deoxycytidine triphosphate deaminase n=1 Tax=Thauera terpenica 58Eu RepID=S9ZQ06_9RHOO
scnpilot_solids1_trim150_scaffold_1940_2
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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387..881
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VK85_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AHX13835.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1940_3
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(958..1380)
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000349CE79
Diadenosine tetraphosphate hydrolase {ECO:0000313|EMBL:AHX13834.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
HIT family hydrolase, diadenosine tetraphosphate hydrolase
scnpilot_solids1_trim150_scaffold_1940_4
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1377..2048)
DNA (672bp) protein (224aa)
Dienelactone hydrolase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VK87_9GAMM
dienelactone hydrolase-like enzyme
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_1940_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2256..3062
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRC4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM02016.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Protein of unknown function (DUF3025)
scnpilot_solids1_trim150_scaffold_1940_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(3187..4641)
DNA (1455bp) protein (485aa)
Putative decarboxylase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G106_SORC5
decarboxylase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
scnpilot_solids1_trim150_scaffold_1940_7
unknown

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comp(4738..5223)
DNA (486bp) protein (162aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1940_8
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5233..5736)
DNA (504bp) protein (168aa)
transcription elongation factor GreB n=1 Tax=Dyella japonica RepID=UPI0003734EB1
Transcription elongation factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; Transcript cleavage factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
transcription elongation factor GreB
scnpilot_solids1_trim150_scaffold_1940_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5918..7411
DNA (1494bp) protein (498aa)
Lytic murein transglycosylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W661_9GAMM
Lytic murein transglycosylase {ECO:0000313|EMBL:EIL94952.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
soluble lytic murein transglycosylase-like protein
scnpilot_solids1_trim150_scaffold_1940_10
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7513..8562)
DNA (1050bp) protein (350aa)
Putative signal transduction protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPA1_9GAMM
Putative signal transduction protein {ECO:0000313|EMBL:EIL89042.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
putative signal transduction protein
scnpilot_solids1_trim150_scaffold_1940_11
unknown

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comp(8788..8889)
DNA (102bp) protein (34aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1940_12
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9117..10109
DNA (993bp) protein (331aa)
Flavin-dependent oxidoreductase n=1 Tax=Rhodanobacter denitrificans RepID=I4WWS1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGM51774.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
luciferase family oxidoreductase, group 1
Displaying 12 items

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