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scnpilot_solids1_trim150_scaffold_1948

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1948_1
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(688..2775)
DNA (2088bp) protein (696aa)
Amylo-alpha-16-glucosidase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8H4_9BRAD rbh
Amylo-alpha-1,6-glucosidase {ECO:0000313|EMBL:CEG08664.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
amylo-alpha-16-glucosidase rbh
scnpilot_solids1_trim150_scaffold_1948_2
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2768..3880)
DNA (1113bp) protein (371aa)
Glycosyl transferase group 1 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8H5_9BRAD rbh
Glycosyl transferase group 1 {ECO:0000313|EMBL:EFI50860.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
group 1 glycosyl transferase rbh
scnpilot_solids1_trim150_scaffold_1948_3
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4157..4381
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NJ19_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS30277.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1948_4
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4507..4779
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NMF3_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS30276.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1948_5
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6422..6637)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NLC3_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS29916.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1948_6
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6760..8607)
DNA (1848bp) protein (616aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NZI8_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS33894.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
site-specific recombinase rbh
scnpilot_solids1_trim150_scaffold_1948_7
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8906..10180
DNA (1275bp) protein (425aa)
Mg chelatase-like protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NRS9_AFIFE rbh
Mg chelatase-like protein {ECO:0000313|EMBL:EKS30185.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
Mg chelatase-like protein; K07391 magnesium chelatase family protein rbh
scnpilot_solids1_trim150_scaffold_1948_8
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10267..10746
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1H6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG10055.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1948_9
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10867..13047
DNA (2181bp) protein (727aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1H5_9BRAD rbh
Signal transduction histidine-protein kinase BarA {ECO:0000313|EMBL:CEG10056.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
MmoS protein rbh
scnpilot_solids1_trim150_scaffold_1948_10
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13171..13821
DNA (651bp) protein (217aa)
ornithine-acyl ACP N-acyltransferase n=1 Tax=Afipia birgiae RepID=UPI0002FC5A3C
Uncharacterized protein {ECO:0000313|EMBL:CEG10057.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1948_11
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13879..14064
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NVF6_AFIFE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKS30188.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
scnpilot_solids1_trim150_scaffold_1948_12
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14061..15017)
DNA (957bp) protein (319aa)
Pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_00215, ECO:0000256|RuleBase:RU003530}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_00215, ECO:0000256|RuleBase:RU003530};; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_00215}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
coaA; pantothenate kinase CoaA (EC:2.7.1.33); K00867 type I pantothenate kinase [EC:2.7.1.33] rbh
Pantothenate kinase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1H3_9BRAD rbh
scnpilot_solids1_trim150_scaffold_1948_13
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15088..15417)
DNA (330bp) protein (110aa)
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071052}; Short=PRA-PH {ECO:0000256|HAMAP-Rule:MF_01020};; EC=3.6.1.31 {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071044};; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hisE; phosphoribosyl-ATP pyrophosphatase (EC:3.6.1.31); K01523 phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
Phosphoribosyl-ATP pyrophosphatase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1H2_9BRAD
scnpilot_solids1_trim150_scaffold_1948_14
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15506..16282)
DNA (777bp) protein (259aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hisF; imidazole glycerol phosphate synthase subunit HisF (EC:4.1.3.-); K02500 cyclase [EC:4.1.3.-] rbh
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1H1_9BRAD rbh
scnpilot_solids1_trim150_scaffold_1948_15
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16283..17020)
DNA (738bp) protein (246aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).
hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16); K01814 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] rbh
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NII6_AFIFE rbh
scnpilot_solids1_trim150_scaffold_1948_16
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17017..17667)
DNA (651bp) protein (217aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hisH; imidazole glycerol phosphate synthase subunit HisH (EC:2.4.2.-); K02501 glutamine amidotransferase [EC:2.4.2.-] rbh
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Afipia felis ATCC 53690 RepID=K8NVG1_AFIFE rbh
scnpilot_solids1_trim150_scaffold_1948_17
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17664..18077)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NP58_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS30194.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
Displaying 17 items

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