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scnpilot_solids1_trim150_scaffold_1983

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1983_1
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..354
DNA (354bp) protein (118aa)
Succinate dehydrogenase and fumarate reductase iron-sulfur protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V757_9BRAD
Fumarate reductase iron-sulfur subunit {ECO:0000313|EMBL:CEG09458.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
scnpilot_solids1_trim150_scaffold_1983_2
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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351..1226
DNA (876bp) protein (292aa)
succinate dehydrogenase, subunit C; K03389 heterodisulfide reductase subunit B [EC:1.8.98.1]
CoB--CoM heterodisulfide reductase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V758_9BRAD rbh
CoB--CoM heterodisulfide reductase, subunit B {ECO:0000313|EMBL:CEG09457.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
scnpilot_solids1_trim150_scaffold_1983_3
Burkholderia sp. H160, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1591..3048
DNA (1458bp) protein (486aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00037874DA rbh
major facilitator superfamily protein rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EEA03170.1}; TaxID=516466 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. H160.;"
scnpilot_solids1_trim150_scaffold_1983_4
CSP1_5_NC10, NC10, Bacteria

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3110..4591
DNA (1482bp) protein (494aa)
aldehyde dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
aldehyde dehydrogenase id=14430376 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=bin3_NC10 organism_group=NC10 rbh
Tax=CSP1_5_NC10
scnpilot_solids1_trim150_scaffold_1983_5
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4838..5542
DNA (705bp) protein (235aa)
ThiJ/PfpI domain-containing protein n=2 Tax=Oligotropha carboxidovorans RepID=F8BH26_OLICM rbh
isonitrile hydratase rbh
ThiJ/PfpI domain-containing protein {ECO:0000313|EMBL:AEI05981.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids1_trim150_scaffold_1983_6
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5589..6503)
DNA (915bp) protein (305aa)
Transcriptional regulator, LysR family n=2 Tax=Oligotropha carboxidovorans RepID=B6JHB1_OLICO rbh
LysR family transcriptional regulator rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AEI05982.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids1_trim150_scaffold_1983_7
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6606..7226
DNA (621bp) protein (207aa)
glutathione S-transferase; K00799 glutathione S-transferase [EC:2.5.1.18] rbh
Glutathione S-transferase GstA {ECO:0000313|EMBL:AEI05983.1}; EC=2.5.1.18 {ECO:0000313|EMBL:AEI05983.1};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
Glutathione S-transferase GstA n=2 Tax=Oligotropha carboxidovorans RepID=B6JHB0_OLICO rbh
scnpilot_solids1_trim150_scaffold_1983_8
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7146..7598)
DNA (453bp) protein (151aa)
Feruloyl-CoA synthetase n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JHA8_OLICO
malonyl-CoA synthase
Uncharacterized protein {ECO:0000313|EMBL:EKS29607.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
scnpilot_solids1_trim150_scaffold_1983_9
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7549..7884)
DNA (336bp) protein (112aa)
lcfB2; long-chain-fatty-acid--CoA ligase LcfB (EC:6.2.1.3)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NGI1_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS29607.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
scnpilot_solids1_trim150_scaffold_1983_10
unknown

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7998..8204
DNA (207bp) protein (69aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1983_11
unknown

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comp(8192..8725)
DNA (534bp) protein (178aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1983_trna_1
unknown

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comp(9293..9366)
DNA (74bp)
transferRNA His
scnpilot_solids1_trim150_scaffold_1983_12
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9512..9964)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P3C2_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAV40475.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata (strain ATCC 25650 / DSM 13394 / JCM 20685 / NBRC; 16684 / NCIMB 2208 / IAM 12614) (Stappia aggregata).;"
phasin
Displaying 13 items

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