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scnpilot_solids1_trim150_scaffold_1996

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1996_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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123..3236
DNA (3114bp) protein (1038aa)
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Ribonuclease E n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6T1_9GAMM
ribonuclease, Rne/Rng family
scnpilot_solids1_trim150_scaffold_1996_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3340..3993)
DNA (654bp) protein (218aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Rhodanobacter denitrificans RepID=I4WXG5_9GAMM
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:EIL99159.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
scnpilot_solids1_trim150_scaffold_1996_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5036..5716
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRW3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM02205.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1996_4
unknown

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6073..6396
DNA (324bp) protein (108aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1996_5
Pseudomonas sp. G5(2012), Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7204..7842)
DNA (639bp) protein (213aa)
HipA domain-containing protein; K07154 serine/threonine-protein kinase HipA [EC:2.7.11.1]
HipA domain-containing protein n=1 Tax=Pseudomonas sp. G5(2012) RepID=S2EUF4_9PSED
HipA domain-containing protein {ECO:0000313|EMBL:EPA95378.1}; TaxID=1268068 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. G5(2012).;"
scnpilot_solids1_trim150_scaffold_1996_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8289..8591)
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Burkholderia bryophila RepID=UPI00036D8882
Uncharacterized protein {ECO:0000313|EMBL:KFJ11474.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1996_7
Desulfosporosinus youngiae, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8606..8878)
DNA (273bp) protein (91aa)
TIR domain-containing protein n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XYY5_9FIRM
TIR domain-containing protein {ECO:0000313|EMBL:EHQ91691.1}; TaxID=768710 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus youngiae DSM 17734.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1996_8

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comp(9021..9239)
DNA (219bp) protein (73aa)
Uncharacterized protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T0ZWM4_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD48958.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1996_9
unknown

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comp(9260..9463)
DNA (204bp) protein (68aa)

This feature has no annotations

Displaying 9 items

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