ggKbase home page

scnpilot_solids1_trim150_scaffold_742_17

Organism: SCNPILOT_SOLID_1_TRIM150_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 16
Location: comp(19930..20319)

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=1 Tax=Xanthomonas axonopodis pv. malvacearum str. GSPB1386 RepID=K8FVY2_9XANT similarity UNIREF
DB: UNIREF100
  • Identity: 44.6
  • Coverage: 121.0
  • Bit_score: 104
  • Evalue 8.10e-20
Uncharacterized protein {ECO:0000313|EMBL:EFF48227.1}; TaxID=427082 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.0
  • Coverage: 121.0
  • Bit_score: 101
  • Evalue 7.40e-19
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 41.8
  • Coverage: 122.0
  • Bit_score: 97
  • Evalue 3.10e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Xanthomonas fuscans → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 390
ATGGCTGAGTCAGCGTTTGGCGTGGTCCTGCGCGAATTACGGGAAGGCCGACAGCTTTCCCTGCGGGACTTGGGCACGCTGGCCGAGGTTGACCACGCGTACATCGCCAAGATCGAGCGCGGGGACAAGGAGCCGCCGCCGGAGGAAACATTTACCCGGTTGGTCCGGCACCTTAAGGCGACGGCGCATCAGGTCGCGGTGCTGCGCTTCTTGCGTACGAGCAATGCCATCGATCCTGCCTTGGCGCTATATGCGCTGACCGACACCGAGGCGACGCCGGACATCCTGGCGATCGCCGCCACCGTTGTGCATCGCGGAGCGGCCCGCCCGTCCCCCGCCGACTTGATCGAACGCGCCCGCCGGGCGAAGCGGATCATGGAAGGTCAGTGA
PROTEIN sequence
Length: 130
MAESAFGVVLRELREGRQLSLRDLGTLAEVDHAYIAKIERGDKEPPPEETFTRLVRHLKATAHQVAVLRFLRTSNAIDPALALYALTDTEATPDILAIAATVVHRGAARPSPADLIERARRAKRIMEGQ*