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scnpilot_solids1_trim150_scaffold_816_15

Organism: SCNPILOT_SOLID_1_TRIM150_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 16
Location: 13320..13886

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=2 Tax=Sphingopyxis RepID=Q1GQE1_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 79.8
  • Coverage: 188.0
  • Bit_score: 304
  • Evalue 7.80e-80
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 79.8
  • Coverage: 188.0
  • Bit_score: 304
  • Evalue 2.40e-80
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABF54131.1}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.8
  • Coverage: 188.0
  • Bit_score: 304
  • Evalue 1.10e-79

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Taxonomy

Sphingopyxis alaskensis → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
GTGAATATCGACCTGACGCAATGTAGCGATCAGGAACTGGCGGCGCTTGCCGACAGCCGCGGCGACGAAGTTTGTCGCGAATTTCTGCGCCGCTACAAGGCTGGTGTCTACCGACTGATCGTCAAGCAGATCGGCGATGCCGATGAGGCGCTGGATTTGACGCAGGAGACGTTCATATCGGGTCTGGCGGCGCTCGGCCGCTTCGATGGCGATCGCCCCTTCCGCGCGTGGATTGCCCGGATCGCGCTCAACAAATGTCGCGACTGGGCGCGCCGGCGCAAGGTGCGGGCCTTTTTTTCCCGCGCGCTTCCGCTCCAGAGCGCCCATCATGTGGCTAGCGATAGCCCTGCGCCCGACGCCGCGGTGACCGACAAACTTGAGATTGCGCGAGTGCGCCAGGCAATCGATCAATTGCCGAATAATTTGCGCGAGGTTCTGATACTGCGCGGCGTCGATGAGGTCAGCCAGGCCGAGACCGCCGCCATCTTGCAGGTGAGCGAGAAGACGGTTGAGACCCGCCTCTATCGCGCGCGGACGAAGCTCAGGGAATTGCTCGCAGGAACATGA
PROTEIN sequence
Length: 189
VNIDLTQCSDQELAALADSRGDEVCREFLRRYKAGVYRLIVKQIGDADEALDLTQETFISGLAALGRFDGDRPFRAWIARIALNKCRDWARRRKVRAFFSRALPLQSAHHVASDSPAPDAAVTDKLEIARVRQAIDQLPNNLREVLILRGVDEVSQAETAAILQVSEKTVETRLYRARTKLRELLAGT*