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scnpilot_solids1_trim150_scaffold_816

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_816_1
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..115)
DNA (114bp) protein (38aa)
Putative copper efflux system periplasmic protein CusF n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQC3_SPHAL
Putative copper efflux system periplasmic protein CusF {ECO:0000313|EMBL:KGB56012.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
putative copper efflux system periplasmic protein CusF
scnpilot_solids1_trim150_scaffold_816_2
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(112..3246)
DNA (3135bp) protein (1045aa)
Heavy metal efflux pump CzcA n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQH0_SPHAL rbh
Heavy metal efflux pump CzcA {ECO:0000313|EMBL:ABF54102.1}; Flags: Precursor;; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;"
heavy metal efflux pump CzcA; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA rbh
scnpilot_solids1_trim150_scaffold_816_3
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3243..4475)
DNA (1233bp) protein (411aa)
Secretion protein HlyD n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQG9_SPHAL rbh
secretion protein HlyD; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB rbh
Secretion protein HlyD {ECO:0000313|EMBL:ABF54103.1}; Flags: Precursor;; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;"
scnpilot_solids1_trim150_scaffold_816_4
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4472..5701)
DNA (1230bp) protein (410aa)
Heavy metal RND efflux outer membrane protein, CzcC family n=2 Tax=Sphingopyxis RepID=Q1GQC6_SPHAL
CzcC family heavy metal RND efflux outer membrane protein
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
scnpilot_solids1_trim150_scaffold_816_5
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5766..6032)
DNA (267bp) protein (89aa)
Uncharacterized protein n=2 Tax=Sphingopyxis RepID=Q1GQC7_SPHAL
hypothetical protein
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
scnpilot_solids1_trim150_scaffold_816_6
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6099..6464)
DNA (366bp) protein (122aa)
Uncharacterized protein n=2 Tax=Sphingopyxis RepID=Q1GQC8_SPHAL
Uncharacterized protein {ECO:0000313|EMBL:KGB56017.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_816_7
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6594..7052)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQD4_SPHAL
Uncharacterized protein {ECO:0000313|EMBL:KGB56018.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_816_8
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7106..9427)
DNA (2322bp) protein (774aa)
Copper-translocating P-type ATPase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQD5_SPHAL rbh
copper-translocating P-type ATPase rbh
Copper-translocating P-type ATPase {ECO:0000313|EMBL:ABF54137.1}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;"
scnpilot_solids1_trim150_scaffold_816_9
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9594..10271)
DNA (678bp) protein (226aa)
Methyltransferase type 12 n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQD6_SPHAL rbh
type 12 methyltransferase rbh
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
scnpilot_solids1_trim150_scaffold_816_10
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10397..11086)
DNA (690bp) protein (230aa)
AraC family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UQX6_9SPHN rbh
AraC family transcriptional regulator {ECO:0000313|EMBL:AJA11429.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
AraC family transcriptional regulator rbh
scnpilot_solids1_trim150_scaffold_816_11
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11119..12072)
DNA (954bp) protein (318aa)
Copper resistance D n=1 Tax=Sphingopyxis sp. MC1 RepID=N9URB5_9SPHN rbh
Copper resistance D {ECO:0000313|EMBL:KGB59283.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
copper resistance D; K07245 putative copper resistance protein D rbh
scnpilot_solids1_trim150_scaffold_816_12
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12092..12475)
DNA (384bp) protein (128aa)
Copper resistance protein CopC n=2 Tax=Sphingopyxis RepID=Q1GQD9_SPHAL
copper resistance protein CopC; K07156
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
scnpilot_solids1_trim150_scaffold_816_13
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12618..12884
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W048_9SPHN
Putative membrane protein {ECO:0000313|EMBL:AJA11432.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_816_14
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12886..13323
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WBM2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KGB56023.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_816_15
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13320..13886
DNA (567bp) protein (189aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=2 Tax=Sphingopyxis RepID=Q1GQE1_SPHAL
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABF54131.1}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;"
scnpilot_solids1_trim150_scaffold_816_16
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14014..15858
DNA (1845bp) protein (615aa)
Copper-resistance protein CopA n=1 Tax=Sphingopyxis sp. MC1 RepID=N9URB2_9SPHN rbh
Copper-resistance protein CopA {ECO:0000313|EMBL:KGB56025.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
copper-resistance protein CopA rbh
scnpilot_solids1_trim150_scaffold_816_17
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15855..16922
DNA (1068bp) protein (356aa)
Copper resistance B n=2 Tax=Sphingopyxis RepID=Q1GQE3_SPHAL rbh
Copper resistance B {ECO:0000313|EMBL:KGB52632.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
copper resistance B; K07233 copper resistance protein B rbh
scnpilot_solids1_trim150_scaffold_816_18
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16963..17487
DNA (525bp) protein (175aa)
Uncharacterized protein n=2 Tax=Sphingopyxis RepID=Q1GQE5_SPHAL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGB59291.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
scnpilot_solids1_trim150_scaffold_816_19
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17875..20580
DNA (2706bp) protein (902aa)
TonB-dependent receptor n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WAV1_9SPHN rbh
TonB-dependent receptor {ECO:0000313|EMBL:ENY80858.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
TonB-dependent receptor rbh
scnpilot_solids1_trim150_scaffold_816_20
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20592..20804
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W037_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY80857.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
Displaying 20 items

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