ggKbase home page

scnpilot_solids1_trim150_scaffold_1264_3

Organism: SCNPILOT_SOLID_1_TRIM150_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 16
Location: comp(3870..4442)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimP n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VP35_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 67.6
  • Coverage: 188.0
  • Bit_score: 245
  • Evalue 5.60e-62
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.6
  • Coverage: 188.0
  • Bit_score: 245
  • Evalue 7.90e-62
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 66.0
  • Coverage: 188.0
  • Bit_score: 239
  • Evalue 9.70e-61

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 573
ATGGACACGCAGGCGCTGGCGCTACGCTTCAGCGAGGCACTGACCGATTTCGGCCTGTGCTGCCTTGGCGTGGAGTTCGTTTCCGGCCAGGGACCGCACACGCTGCGCGTATACGTGGATCTGCTGGATGATGCGGTGTCAGACGCAGGCGCGGATGACAAGGTCGATGGCAAGGGATCGCTGTCGCGCGGGGTGACCGTCGACCAATGCGAGAGCGCCAGCCGCGAGATTTCCGCGTTGCTGGACGTTGATGATCCGATCCCGGGCCATTATGTATTGGAGGTGTCGTCGCCGGGGCTGGATCGGCCATTGTTTTCAGCCGATCAGTTCTCGAAGGCATGCGGCAGCGAGGTGAAACTGCTGTTCCGTGCACCGCTGGAAGGTCGTCGTCGACTACGCGGAAAGATACTGGGCGTGGACGGTGGGCAGATCACGCTGGAAGCCGAGCACAAAACCTGGCAGTTCGATCATGCGTTGGTGGAATCGGCACGCGTGGTGCCCGATTGGGTGGCGCTGGGACATGCCCCCCAACCCAAACCCGGTCGCCCCGCGCGCAGGAAGCAGAAAAGCTAG
PROTEIN sequence
Length: 191
MDTQALALRFSEALTDFGLCCLGVEFVSGQGPHTLRVYVDLLDDAVSDAGADDKVDGKGSLSRGVTVDQCESASREISALLDVDDPIPGHYVLEVSSPGLDRPLFSADQFSKACGSEVKLLFRAPLEGRRRLRGKILGVDGGQITLEAEHKTWQFDHALVESARVVPDWVALGHAPQPKPGRPARRKQKS*