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scnpilot_solids1_trim150_scaffold_1264

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1264_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..2070)
DNA (2070bp) protein (690aa)
Translation initiation factor IF-2 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6J9_9GAMM
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
bacterial translation initiation factor 2 (bIF-2)
scnpilot_solids1_trim150_scaffold_1264_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2195..3700)
DNA (1506bp) protein (502aa)
Transcription elongation factor NusA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6J8_9GAMM
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
transcription termination factor NusA
scnpilot_solids1_trim150_scaffold_1264_3
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3870..4442)
DNA (573bp) protein (191aa)
Ribosome maturation factor RimP n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VP35_9GAMM
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1264_4
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4774..5607)
DNA (834bp) protein (278aa)
tungsten ABC transporter substrate-binding protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003123B73
Sulfate transporter {ECO:0000313|EMBL:KDB01752.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17.;"
basic organic compound ABC-transporter; K05772 tungstate transport system substrate-binding protein
scnpilot_solids1_trim150_scaffold_1264_5
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5626..6402)
DNA (777bp) protein (259aa)
ABC-type tungstate transport system, ATP-binding protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RIM2_9RHIZ
ABC-type tungstate transport system, ATP-binding protein {ECO:0000313|EMBL:ESR25184.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
ABC-type polar amino acid transport system, ATPase component; K06857 tungstate transport system ATP-binding protein
scnpilot_solids1_trim150_scaffold_1264_6
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6395..7099)
DNA (705bp) protein (235aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BW47_NITHN
binding-protein-dependent transporters inner membrane component; K05773 tungstate transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADE13697.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
scnpilot_solids1_trim150_scaffold_1264_7
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7216..9369)
DNA (2154bp) protein (718aa)
formate dehydrogenase subunit alpha; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2]
Formate dehydrogenase, alpha subunit n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BVU0_NITHN
Formate dehydrogenase, alpha subunit {ECO:0000313|EMBL:ADE15519.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
scnpilot_solids1_trim150_scaffold_1264_8
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9366..10076)
DNA (711bp) protein (237aa)
formate dehydrogenase subunit alpha; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2]
Formate dehydrogenase, alpha subunit n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BVU0_NITHN
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
scnpilot_solids1_trim150_scaffold_1264_9
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10076..11773)
DNA (1698bp) protein (566aa)
Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3]
Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BVT9_NITHN
Respiratory-chain NADH dehydrogenase domain 51 kDa subunit {ECO:0000313|EMBL:ADE15518.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
scnpilot_solids1_trim150_scaffold_1264_10
Methylomonas denitrificans, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11958..12164
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Methylomonas sp. MK1 RepID=UPI00035CB3C3
Uncharacterized protein {ECO:0000313|EMBL:KHD33192.1}; TaxID=1538553 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas denitrificans.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1264_11
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12173..13441)
DNA (1269bp) protein (423aa)
moeA2; molybdopterin biosynthesis protein; K03750 molybdopterin molybdotransferase [EC:2.10.1.1]
Probable molybdopterin biosynthesis MOEA protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BQX8_9GAMM rbh
Probable molybdopterin biosynthesis MOEA protein {ECO:0000313|EMBL:EAR21978.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis Nb-231.;"
scnpilot_solids1_trim150_scaffold_1264_12
endosymbiont of unidentified scaly snail isolate Monju, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13540..14166)
DNA (627bp) protein (209aa)
Molybdenum cofactor guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316, ECO:0000256|SAAS:SAAS00049907}; Short=MoCo guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316};; EC=2.7.7.77 {ECO:0000256|HAMAP-Rule:MF_00316, ECO:0000256|SAAS:SAAS00049907};; GTP:molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Mo-MPT guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin-guanine dinucleotide synthase {ECO:0000256
molybdenum cofactor guanylyltransferase; K03752 molybdopterin-guanine dinucleotide biosynthesis protein A [EC:2.7.7.77]
Probable molybdenum cofactor guanylyltransferase n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BS90_9GAMM
scnpilot_solids1_trim150_scaffold_1264_13
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14153..15319)
DNA (1167bp) protein (389aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI000382C56B rbh
UBA/THIF-type NAD/FAD binding protein rbh
UBA/THIF-type NAD/FAD binding protein {ECO:0000313|EMBL:ADE14551.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
scnpilot_solids1_trim150_scaffold_1264_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(15354..15710)
DNA (357bp) protein (119aa)
UBA/THIF-type NAD/FAD binding protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C0Z4_NITHN
MoaD family protein {ECO:0000313|EMBL:CDM66173.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
UBA/THIF-type NAD/FAD binding protein
scnpilot_solids1_trim150_scaffold_1264_15
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15701..16468)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BQX6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAR21976.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis Nb-231.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1264_16
Spiribacter salinus, Spiribacter, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16465..17697)
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Spiribacter salinus M19-40 RepID=R4VCS8_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGM40151.1}; TaxID=1260251 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Spiribacter.;" source="Spiribacter salinus M19-40.;"
scnpilot_solids1_trim150_scaffold_1264_17
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17721..18761
DNA (1041bp) protein (347aa)
Cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Rule:MF_01225}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Cyclic pyranopterin monophosphate synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBP4_9GAMM
moaA; molybdenum cofactor biosynthesis protein A rbh
scnpilot_solids1_trim150_scaffold_1264_18
Halorhodospira halophila, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18851..19084
DNA (234bp) protein (78aa)
molybdopterin biosynthesis MoaE; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-]
Molybdopterin synthase subunit MoaE n=1 Tax=Halorhodospira halophila (strain DSM 244 / SL1) RepID=A1WWR6_HALHL
Molybdopterin synthase subunit MoaE {ECO:0000313|EMBL:ABM62128.1}; TaxID=349124 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodospira halophila (strain DSM 244 / SL1) (Ectothiorhodospira; halophila (strain DSM 244 / SL1)).;"
scnpilot_solids1_trim150_scaffold_1264_19
Alcanivorax dieselolei, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19081..19245
DNA (165bp) protein (55aa)
Molybdopterin synthase subunit MoaE n=1 Tax=Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5) RepID=K0C8P5_ALCDB
moaE; molybdopterin synthase subunit MoaE
Molybdopterin synthase subunit MoaE {ECO:0000313|EMBL:AFT68890.1}; TaxID=930169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5).;"
scnpilot_solids1_trim150_scaffold_1264_20
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19235..19528
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BPZ6_9GAMM
sulfur transfer protein ThiS
Uncharacterized protein {ECO:0000313|EMBL:EAR22151.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis Nb-231.;"
scnpilot_solids1_trim150_scaffold_1264_21
Alcanivorax sp. PN-3, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19536..20540
DNA (1005bp) protein (335aa)
Molybdopterin-guanine dinucleotide biosynthesis protein MoaC n=1 Tax=Alcanivorax sp. PN-3 RepID=U7HYH1_9GAMM
Molybdopterin-guanine dinucleotide biosynthesis protein MoaC {ECO:0000313|EMBL:ERS14757.1}; TaxID=1397526 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax sp. PN-3.;"
moaC; molybdenum cofactor biosynthesis protein
scnpilot_solids1_trim150_scaffold_1264_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20575..22029)
DNA (1455bp) protein (485aa)
NADH dehydrogenase subunit N (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
NADH-quinone oxidoreductase subunit N n=1 Tax=Rhodanobacter denitrificans RepID=I4WLS9_9GAMM
scnpilot_solids1_trim150_scaffold_1264_23
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22175..23683)
DNA (1509bp) protein (503aa)
NADH:ubiquinone oxidoreductase subunit M {ECO:0000313|EMBL:EIL99941.1}; EC=1.6.99.5 {ECO:0000313|EMBL:EIL99941.1};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
NADH dehydrogenase subunit M (EC:1.6.5.3)
NADH:ubiquinone oxidoreductase subunit M n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKF0_9GAMM
scnpilot_solids1_trim150_scaffold_1264_24
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23698..25704)
DNA (2007bp) protein (669aa)
NADH dehydrogenase subunit L (EC:1.6.5.3)
NADH:ubiquinone oxidoreductase subunit L n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VP32_9GAMM
NADH:ubiquinone oxidoreductase subunit L {ECO:0000313|EMBL:EIL88973.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
scnpilot_solids1_trim150_scaffold_1264_25
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25709..26014)
DNA (306bp) protein (102aa)
NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01456};; NADH dehydrogenase I subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; NDH-1 subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
NADH-quinone oxidoreductase subunit K n=1 Tax=Rhodanobacter denitrificans RepID=I4WLS6_9GAMM
scnpilot_solids1_trim150_scaffold_1264_26
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26011..26658)
DNA (648bp) protein (216aa)
NADH:ubiquinone oxidoreductase subunit J {ECO:0000313|EMBL:EIL99944.1}; EC=1.6.99.5 {ECO:0000313|EMBL:EIL99944.1};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
NADH:ubiquinone oxidoreductase subunit 6 (chain J) (EC:1.6.5.3)
NADH:ubiquinone oxidoreductase subunit J n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKF3_9GAMM
scnpilot_solids1_trim150_scaffold_1264_27
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26664..27131)
DNA (468bp) protein (156aa)
NADH-quinone oxidoreductase subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01351};; NADH dehydrogenase I subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; NDH-1 subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
NADH dehydrogenase subunit I (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit I n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKF4_9GAMM
Displaying 27 items

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