ggKbase home page

scnpilot_solids1_trim150_scaffold_1623_5

Organism: SCNPILOT_SOLID_1_TRIM150_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 16
Location: 3086..4204

Top 3 Functional Annotations

Value Algorithm Source
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1280944 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. CY54-11-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.4
  • Coverage: 355.0
  • Bit_score: 264
  • Evalue 1.90e-67
hypothetical protein n=1 Tax=Henriciella marina RepID=UPI00035D1308 similarity UNIREF
DB: UNIREF100
  • Identity: 36.5
  • Coverage: 351.0
  • Bit_score: 242
  • Evalue 9.30e-61
CRISPR-associated protein Cas1 similarity KEGG
DB: KEGG
  • Identity: 27.0
  • Coverage: 345.0
  • Bit_score: 137
  • Evalue 7.80e-30

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hyphomonas sp. CY54-11-8 → Hyphomonas → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1119
ATGCTTAAGCAAGTCGCCACCGAGAAATTTGGAGACGATGAAATTTGGAGGGAACGCTCCGAATTCTGGGGCAGCTACAAGCCGCCGGCGAGCCGCGGCGGGCGAAAGAAGTATAAATATCGCGAGCCACTAATTCTTTGCGGGCACGGCCTGAGAATTTCCGTGGATCATCGGACCCTCCTAATTCGGAACGGGTTCACGCATTATCCGCAGAAACCGGAAGAATTCCGGTTTTTCCCTGGCGATGCGAATTTGCCCGACAGGGTTGCCGTAATTGATGGCAGCGGTGGCATAACATTTGACGCCCTTAGTTGGATGGCCGAACAGAATATTGAGTTCATCCGCCTGAATTGGCAGGGAAAAGTCATAAATATCGGGAATAACCCAGGATACTCCGCCAATCCGAAATTGGTGGATACGCAAAGGGCAATTCGCGGCACTAAGCGCCAAATCGAAATTGCCAGATGGCTTATTGCGGCCAAGCTCGAAAATTCGATTTCAACCCTGCGAAATTCAATTCCCAAATCAGAAAATCGTGAAAAGGTAATTTCGAAACTGGAGGGTCGAATTTTGGAAATTCGAAATCCACGAAATTCTTTTTCGGTTCCGAAATTGCTTGGAATTGAAGGCCCATCCGCGCGGGATTATTTCGGCGCGTGGCGAGGCCTGCCCCTTAACTGGAAAGGCCTCAAGGGAAGGCCTATTCCAGTGGATTGGAAGGAATTCTCGACCCGCAAGATGGGCTGGCGGAAGCGGTCCCGTGTGGCTCGGCACCCCATTAACGCCATGCTCAACTACGGCTATGGAATTTTAGCCAATCAGGTCCGTTCGGAAATTGTTGCCGCTGGGCTGGACCCGACCATTGGCATCCTTCATGGCAACAGCGAAAATCCGAACCCGCTAGTTTACGATTTAATGGAGCCTTTAAGACCACAAGTCGATCAGGCGGTTCTTGAATTTGTGAAGCGTCACGATTTCAGCTCTGGGGATTTCACGATCAATAAATGGGGCGGGTGCCGGTTAAATCCGCAGATGGCACAAGCTTTGGTAAGGCAGGTTTCCGGAGTTGAGTGTCGGGAACATATTGAGGATTTTATGCGGTCGATCGCGAGTTGTTGA
PROTEIN sequence
Length: 373
MLKQVATEKFGDDEIWRERSEFWGSYKPPASRGGRKKYKYREPLILCGHGLRISVDHRTLLIRNGFTHYPQKPEEFRFFPGDANLPDRVAVIDGSGGITFDALSWMAEQNIEFIRLNWQGKVINIGNNPGYSANPKLVDTQRAIRGTKRQIEIARWLIAAKLENSISTLRNSIPKSENREKVISKLEGRILEIRNPRNSFSVPKLLGIEGPSARDYFGAWRGLPLNWKGLKGRPIPVDWKEFSTRKMGWRKRSRVARHPINAMLNYGYGILANQVRSEIVAAGLDPTIGILHGNSENPNPLVYDLMEPLRPQVDQAVLEFVKRHDFSSGDFTINKWGGCRLNPQMAQALVRQVSGVECREHIEDFMRSIASC*