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scnpilot_solids1_trim150_scaffold_1623

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1623_1
Hyphomonas atlantica, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..1024)
DNA (1023bp) protein (341aa)
DNA-directed DNA polymerase B n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD110E
Uncharacterized protein {ECO:0000313|EMBL:KCZ60298.1}; TaxID=1280948 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas atlantica.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1623_2
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1021..1398)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HGX3_METFS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB03036.1}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
scnpilot_solids1_trim150_scaffold_1623_3
Hyphomonas sp. CY54-11-8, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1415..1999)
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Henriciella marina RepID=UPI0003622F2B
Uncharacterized protein {ECO:0000313|EMBL:KCZ49716.1}; TaxID=1280944 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. CY54-11-8.;"
scnpilot_solids1_trim150_scaffold_1623_4
unknown

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2092..3093
DNA (1002bp) protein (334aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1623_5
Hyphomonas sp. CY54-11-8, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3086..4204
DNA (1119bp) protein (373aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1280944 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. CY54-11-8.;"
hypothetical protein n=1 Tax=Henriciella marina RepID=UPI00035D1308
CRISPR-associated protein Cas1
scnpilot_solids1_trim150_scaffold_1623_6
Micavibrio aeruginosavorus, Micavibrio, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4536..5696)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Micavibrio aeruginosavorus EPB RepID=M4VF15_9PROT rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGH97818.1}; TaxID=349215 species="Bacteria; Proteobacteria; Alphaproteobacteria; Micavibrio.;" source="Micavibrio aeruginosavorus EPB.;"
scnpilot_solids1_trim150_scaffold_1623_7
Methylomonas denitrificans, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5698..6105)
DNA (408bp) protein (136aa)
DNA mismatch endonuclease Vsr; K07458 DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
DNA mismatch endonuclease Vsr n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RKA3_METP4
DNA mismatch repair protein Vsr {ECO:0000313|EMBL:KHD30480.1}; TaxID=1538553 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas denitrificans.;"
scnpilot_solids1_trim150_scaffold_1623_8
Micavibrio aeruginosavorus, Micavibrio, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6119..7126
DNA (1008bp) protein (336aa)
Site-specific DNA methylase n=1 Tax=Micavibrio aeruginosavorus EPB RepID=M4VX91_9PROT rbh
Site-specific DNA methylase rbh
Site-specific DNA methylase {ECO:0000313|EMBL:AGH97819.1}; TaxID=349215 species="Bacteria; Proteobacteria; Alphaproteobacteria; Micavibrio.;" source="Micavibrio aeruginosavorus EPB.;"
scnpilot_solids1_trim150_scaffold_1623_9
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

7130..9229
DNA (2100bp) protein (700aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
Histidine kinase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XUR9_9BACT rbh
ATP binding/ATPase (HATPase c) domain-containing protein rbh
scnpilot_solids1_trim150_scaffold_1623_10
unknown

Not on your lists

9226..10593
DNA (1368bp) protein (456aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1623_11
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11217..12032
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HWZ3_PARL1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS64426.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
Displaying 11 items

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