ggKbase home page

scnpilot_solids1_trim150_scaffold_1014_15

Organism: SCNPILOT_SOLID_1_TRIM150_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 16
Location: comp(16750..17541)

Top 3 Functional Annotations

Value Algorithm Source
TrbJ n=1 Tax=Bordetella pertussis RepID=Q08KZ3_BORPT similarity UNIREF
DB: UNIREF100
  • Identity: 56.6
  • Coverage: 249.0
  • Bit_score: 266
  • Evalue 3.30e-68
TrbJ {ECO:0000313|EMBL:BAF33465.1}; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.6
  • Coverage: 249.0
  • Bit_score: 266
  • Evalue 4.60e-68
conjugal transfer protein TrbJ similarity KEGG
DB: KEGG
  • Identity: 49.0
  • Coverage: 257.0
  • Bit_score: 260
  • Evalue 5.60e-67

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bordetella pertussis → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 792
ATGGTTAAGCGGATGAATAAGCGCGCAGGCTGCTCAAATCGGGCGATCACTGCTGCTGCCATGATTGCAACCCTTTTCGCCTTACCGACTCCGGCAGTCCGGGCCGGTGGAGTTCCCGTTTTCGATGCCGCCAACATGCAGCAGAACGTCATTTCGGCAATTGAAGGCGTGAACCAGACCATGAAGATGGTCGAGCAGTACCAGTTGCAGCTTTTGCAATACGAGAACATGTTGCGAAACTCGGTCGCTCCTACCGCCTACGTCTGGAACCAGGCGCAGATGACTACCATGCGCTTGATGGGCGCGATGAACACGCTGCAGTACTACCGCAACCAGGCCGGCAGTCTCGATGGCTACCTGCTGCGCTACCAGAACCCGTCCTATTACATGAATTCGCCCTGTTTCGGGCCGAACGGTTGTACAGTGGAAGAGCGAGCAAACCTTGAGACTAACCGGCGCCTAAATGCGGATGGCGAGAAACTTGCAAACGATGCAATGATTCGCAGCCTCGAGCTGCAGGAGCTGGAACTGCAGGCGGACGCGGCAAGGCTCGAGCAGTTGCAGAGGAATGCCGAGGATGCGCCAGGGCAGATGGCGGCAATCCAGGCAGCAAACCAGCTCGCGAGCAACCAGGCGAGTCAGCTCATGCAAATCCGCGCCTTGCTGATTGCACAGCAAAATGCCGAGGCGGCACGGCAGGCAAGGATTGCGGATATCGAGGCGCAGCAGGCGGCAGCAGCAGTGCAGGCAAGGCAAGGGACTTTTCGTCGTAGTACCCCTAGAGAATGGTAA
PROTEIN sequence
Length: 264
MVKRMNKRAGCSNRAITAAAMIATLFALPTPAVRAGGVPVFDAANMQQNVISAIEGVNQTMKMVEQYQLQLLQYENMLRNSVAPTAYVWNQAQMTTMRLMGAMNTLQYYRNQAGSLDGYLLRYQNPSYYMNSPCFGPNGCTVEERANLETNRRLNADGEKLANDAMIRSLELQELELQADAARLEQLQRNAEDAPGQMAAIQAANQLASNQASQLMQIRALLIAQQNAEAARQARIADIEAQQAAAAVQARQGTFRRSTPREW*