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scnpilot_solids1_trim150_scaffold_1014

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1014_1
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..424
DNA (423bp) protein (141aa)
Transposase IS911 n=2 Tax=Alcaligenes faecalis RepID=J0JE18_ALCFA
Transposase IS911 {ECO:0000313|EMBL:EJC61974.1}; TaxID=1156918 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes faecalis subsp. faecalis NCIB 8687.;"
transposase IS3/IS911 family protein
scnpilot_solids1_trim150_scaffold_1014_2
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

559..1335
DNA (777bp) protein (259aa)
Integrase catalytic subunit n=3 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0B7D8_ALCFA rbh
Integrase catalytic subunit {ECO:0000313|EMBL:EJC61975.1}; TaxID=1156918 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes faecalis subsp. faecalis NCIB 8687.;"
tnpB; transposase catalytic site ISRme15
scnpilot_solids1_trim150_scaffold_1014_3
unknown

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comp(1366..1599)
DNA (234bp) protein (78aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1014_4
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1662..2426)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Thauera phenylacetica B4P RepID=N6YMU8_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO95656.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1014_5
unknown

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comp(2508..2624)
DNA (117bp) protein (39aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1014_6
Pseudomonas amygdali, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2717..7720)
DNA (5004bp) protein (1668aa)
hypothetical protein n=1 Tax=Pseudomonas amygdali RepID=UPI0002F699D5 rbh
Damage-inducible protein {ECO:0000313|EMBL:KEZ25864.1}; TaxID=1189622 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas amygdali.;" source="Pseudomonas amygdali pv. tabaci str. 6605.;"
helicase domain-containing protein rbh
scnpilot_solids1_trim150_scaffold_1014_7
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7794..8054)
DNA (261bp) protein (87aa)
Putative uncharacterized protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CL03_VARPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS21154.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
scnpilot_solids1_trim150_scaffold_1014_8
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8234..10873)
DNA (2640bp) protein (880aa)
Chromosome segregation protein {ECO:0000313|EMBL:EXI85316.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
AAA domain protein id=12493718 bin=THIO_HI species=Burkholderia pseudomallei genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
AAA domain protein
scnpilot_solids1_trim150_scaffold_1014_9
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10870..12003)
DNA (1134bp) protein (378aa)
Exonuclease subunit SbcD {ECO:0000313|EMBL:EXI78315.1}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
calcineurin-like phosphoesterase family protein id=12493719 bin=THIO_HI species=Methyloversatilis universalis genus=Methyloversatilis taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
calcineurin-like phosphoesterase family protein rbh
scnpilot_solids1_trim150_scaffold_1014_10
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12059..14347)
DNA (2289bp) protein (763aa)
metallophosphoesterase n=1 Tax=Sphingobium xenophagum RepID=UPI00036714A8 rbh
metallophosphoesterase rbh
Putative metallophosphoesterase {ECO:0000313|EMBL:CAP54063.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
scnpilot_solids1_trim150_scaffold_1014_11
unknown

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comp(14601..14738)
DNA (138bp) protein (46aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1014_12
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14741..15247)
DNA (507bp) protein (169aa)
Mating pair formation protein n=1 Tax=Burkholderia cepacia RepID=J9RTT5_BURCE
transglycosylase SLT domain-containing protein 6
Muramidase TrbN {ECO:0000313|EMBL:CAI47826.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
scnpilot_solids1_trim150_scaffold_1014_13

Not on your lists

comp(15207..16529)
DNA (1323bp) protein (441aa)
Mating pair formation protein n=1 Tax=uncultured bacterium RepID=J9R8T0_9BACT
Mating pair formation protein {ECO:0000313|EMBL:AFR44387.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
conjugal transfer, TrbL; K07344 type IV secretion system protein TrbL
scnpilot_solids1_trim150_scaffold_1014_14
unknown

Not on your lists

comp(16534..16740)
DNA (207bp) protein (69aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1014_15
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16750..17541)
DNA (792bp) protein (264aa)
TrbJ n=1 Tax=Bordetella pertussis RepID=Q08KZ3_BORPT
TrbJ {ECO:0000313|EMBL:BAF33465.1}; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis.;"
conjugal transfer protein TrbJ
Displaying 15 items

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