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scnpilot_solids1_trim150_scaffold_1571_1

Organism: SCNPILOT_SOLID_1_TRIM150_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 16
Location: 2..1303

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TrbI n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8ADK9_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 73.0
  • Coverage: 437.0
  • Bit_score: 634
  • Evalue 9.80e-179
  • rbh
Conjugal transfer protein TrbI {ECO:0000313|EMBL:EMS95932.1}; TaxID=1281779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens str. Cherry 2E-2-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.0
  • Coverage: 437.0
  • Bit_score: 634
  • Evalue 1.40e-178
Conjugation TrbI-like protein; K03195 type IV secretion system protein VirB10 similarity KEGG
DB: KEGG
  • Identity: 72.9
  • Coverage: 435.0
  • Bit_score: 625
  • Evalue 1.40e-176
  • rbh

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1302
CTCCAACTTGGCGGCGCCCCAAATAAGGACACGGGGTCAGGCATTCGCCGGTTGAACCGCCTTCCGATCATGGTGGTGATCGGGGTGGTCATCCTCTTCCTTGCGGTCATTATCTACGGCCTGAGTTCACGAGGTCTCTACTTCGGAAACAGGTCGGGCATCGATCAGACGTCGGGCGATCCTGCTTCAACCTATGCCGACCGGCTGAAGCGCGGCGTCAGCAACGGCATCATCGGTGAACCTCGGCAGGAAGCGGCATTCCAGCCGAGCCCGGTCGAGGCGAAGCCGCAGCCTGAAGGCAACCCATTCCAGCCTGATCCGAAGCGTGTCGACGATGGACAAGAATACGGACTCGAGCCGGAAGCGGTCTGGCGGGCGCGGCTGGAGCGCGAGCAACAGGAACAGTATCTGCGCGAGCGCCATCGCCAGCGGATGGCGCGACTGCAGGCCAATGACGCCGCCTACGATGCTCCCATCGCGGTCGACGGCGCAAAATTCGAGGGCATGGGAGGAGAGCCGGCTTCGAACAGGACGGACCCGCAAAACAGGGTCGCGGGCACGCCGCGTGGCGGCGCGGCCGATCTCTATGCGGCGGCGCTTCAAGCAGGGATCGACGGCGAAAACCTCGATCCGAACGGGCAGCGGACAAAGGAAAAATTCTTCAACGCCGACCTCAAGGAACTCGGATATCTGCCGAACCGGGTCGTTCCCCAGCTTTCGCCCTTCGAGTTAAAACGCGGATCGGTCATTCCCGCGACGCTGATCACCGGCATCAACTCCGACCTTCCCGGACGCATCGCAGCGCAGGTCTCTCAAAACGTCTATGATTCAGCGACGGGCCGCCGGCTGCTCATCCCGCAAGGAGCAAAACTGTTCGGACGTTACGACAGCAAGGTCGCGTTCGGCCAAAGCCGCGTCCTCGTCGTCTGGACCGACATCGTCTTCCCGGACGGCTCCACTCTCCAGATCGGCGGCATGGCCGGAACGGATGCGGAAGGGTATGGAGGATTTCATGACAAGGTCGACAACCACTACCTGAAAACCTTCGGTTCGGCGGTCCTGATCGCGCTGATCGGAACCGGCATCGATATGGCCATGCCCGAAAGCTCGACACTGGCCACCCAGGATACCGCATCAGATGCCGCTCGGCGCAACTTCGGCGAAACGTTCGGTCGCGTTGCCGAACGCACCATCGGCAAGAACCTCAAAGTCCAGCCGACGCTGAAAATCCGGCCGGGCTACAAGTTCAACGTCCTCGTTGACCAGGACATCGTGTTTCCGGGCGTCTATCGTGGTCGATAG
PROTEIN sequence
Length: 434
LQLGGAPNKDTGSGIRRLNRLPIMVVIGVVILFLAVIIYGLSSRGLYFGNRSGIDQTSGDPASTYADRLKRGVSNGIIGEPRQEAAFQPSPVEAKPQPEGNPFQPDPKRVDDGQEYGLEPEAVWRARLEREQQEQYLRERHRQRMARLQANDAAYDAPIAVDGAKFEGMGGEPASNRTDPQNRVAGTPRGGAADLYAAALQAGIDGENLDPNGQRTKEKFFNADLKELGYLPNRVVPQLSPFELKRGSVIPATLITGINSDLPGRIAAQVSQNVYDSATGRRLLIPQGAKLFGRYDSKVAFGQSRVLVVWTDIVFPDGSTLQIGGMAGTDAEGYGGFHDKVDNHYLKTFGSAVLIALIGTGIDMAMPESSTLATQDTASDAARRNFGETFGRVAERTIGKNLKVQPTLKIRPGYKFNVLVDQDIVFPGVYRGR*