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scnpilot_solids1_trim150_scaffold_6912

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_6912_1
unknown

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comp(3..125)
DNA (123bp) protein (41aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_6912_2
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(173..382)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RFD6_PHEZH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG78706.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
scnpilot_solids1_trim150_scaffold_6912_3
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(393..1136)
DNA (744bp) protein (248aa)
Spermidine synthase family protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y6H3_9RHIZ
Spermidine synthase family protein {ECO:0000313|EMBL:EHH12663.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
spermidine synthase family protein
scnpilot_solids1_trim150_scaffold_6912_4
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1293..2684)
DNA (1392bp) protein (464aa)
fumC; fumarate hydratase; K01679 fumarate hydratase, class II [EC:4.2.1.2] rbh
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
Fumarate hydratase class II n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HVX1_PARL1 rbh
scnpilot_solids1_trim150_scaffold_6912_5
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2681..3106)
DNA (426bp) protein (142aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17.;"
Plasmid stability protein StbB n=1 Tax=Rhodobacter capsulatus YW2 RepID=V8HQ30_RHOCA
PilT protein-like protein; K07062
scnpilot_solids1_trim150_scaffold_6912_6
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3103..3381)
DNA (279bp) protein (93aa)
Plasmid stabilization protein n=1 Tax=Rhodobacter capsulatus YW1 RepID=V8HAH1_RHOCA
Plasmid stability protein {ECO:0000313|EMBL:EJJ27712.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
plasmid stability protein
scnpilot_solids1_trim150_scaffold_6912_7
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3435..3800)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WU88_9BRAD
hypothetical protein; K09985 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EAQ36455.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
Displaying 7 items

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