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scnpilot_solids1_trim150_scaffold_9

Search features with annotation key words

Displaying items 1-30 of 326 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_9_1
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..547
DNA (546bp) protein (182aa)
cell envelope biogenesis protein OmpA n=1 Tax=Hoeflea sp. 108 RepID=UPI00036EB901
OmpA/MotB protein {ECO:0000313|EMBL:KFB10310.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
OmpA/MotB
scnpilot_solids1_trim150_scaffold_9_2
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(679..1638)
DNA (960bp) protein (320aa)
Pseudouridine-5'-phosphate glycosidase {ECO:0000256|HAMAP-Rule:MF_01876}; Short=PsiMP glycosidase {ECO:0000256|HAMAP-Rule:MF_01876};; EC=4.2.1.70 {ECO:0000256|HAMAP-Rule:MF_01876};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Pseudouridine-5'-phosphate glycosidase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HS55_9RHIZ rbh
Indigoidine synthase A family protein
scnpilot_solids1_trim150_scaffold_9_3
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1635..2531)
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000367194B
Carbohydrate kinase {ECO:0000313|EMBL:ESY92124.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
sugar kinase, ribokinase
scnpilot_solids1_trim150_scaffold_9_4
Mesorhizobium sp. LNJC395A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2789..3877
DNA (1089bp) protein (363aa)
Recombinase RecA n=96 Tax=Rhizobiales RepID=V7F2B4_9RHIZ
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1287275 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC395A00.;"
recA protein; K03553 recombination protein RecA
scnpilot_solids1_trim150_scaffold_9_5
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4025..6685
DNA (2661bp) protein (887aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
alaS; alanyl-tRNA synthetase; K01872 alanyl-tRNA synthetase [EC:6.1.1.7] rbh
Alanine--tRNA ligase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HS52_9RHIZ rbh
scnpilot_solids1_trim150_scaffold_9_6
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6783..6947)
DNA (165bp) protein (55aa)
UPI0003CECEF8 related cluster n=1 Tax=unknown RepID=UPI0003CECEF8
Uncharacterized protein {ECO:0000313|EMBL:ESW92805.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_9_7
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7172..8650)
DNA (1479bp) protein (493aa)
UPI0003CF95A3 related cluster n=1 Tax=unknown RepID=UPI0003CF95A3
MFS transporter {ECO:0000313|EMBL:ESY73391.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
major facilitator superfamily protein
scnpilot_solids1_trim150_scaffold_9_8
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8909..10441)
DNA (1533bp) protein (511aa)
carboxyl transferase; K01966 propionyl-CoA carboxylase beta chain [EC:6.4.1.3] rbh
UPI0003CFA6D8 related cluster n=1 Tax=unknown RepID=UPI0003CFA6D8 rbh
Methylmalonyl-CoA carboxyltransferase {ECO:0000313|EMBL:ESY91064.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
scnpilot_solids1_trim150_scaffold_9_9
Mesorhizobium sp. L2C085B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10548..11498
DNA (951bp) protein (317aa)
Transporter n=1 Tax=Mesorhizobium sp. LNJC394B00 RepID=V7G895_9RHIZ rbh
Transporter {ECO:0000313|EMBL:ESZ16870.1}; TaxID=1287117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C085B000.;"
auxin efflux carrier; K07088 rbh
scnpilot_solids1_trim150_scaffold_9_10
unknown

Not on your lists

comp(11372..11674)
DNA (303bp) protein (101aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_9_11
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11689..13146
DNA (1458bp) protein (486aa)
Succinate-semialdehyde dehydrogenase I, NADP-dependent {ECO:0000313|EMBL:CDX44530.1}; EC=1.2.1.16 {ECO:0000313|EMBL:CDX44530.1};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
UPI0003CEE9C9 related cluster n=1 Tax=unknown RepID=UPI0003CEE9C9 rbh
succinate-semialdehyde dehydrogenase rbh
scnpilot_solids1_trim150_scaffold_9_12
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13118..14170
DNA (1053bp) protein (351aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
aldose 1-epimerase; K01785 aldose 1-epimerase [EC:5.1.3.3]
UPI0003CED88B related cluster n=1 Tax=unknown RepID=UPI0003CED88B
scnpilot_solids1_trim150_scaffold_9_13
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14218..15138)
DNA (921bp) protein (307aa)
Ketodeoxygluconokinase {ECO:0000313|EMBL:CCV07488.1}; EC=2.7.1.45 {ECO:0000313|EMBL:CCV07488.1};; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
PfkB domain-containing protein; K00874 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] rbh
Ketodeoxygluconokinase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EUA3_9RHIZ rbh
scnpilot_solids1_trim150_scaffold_9_14
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15284..15721
DNA (438bp) protein (146aa)
Auxin-binding protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HST7_9RHIZ
Auxin-binding protein {ECO:0000313|EMBL:EHK56163.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
auxin-binding protein
scnpilot_solids1_trim150_scaffold_9_15
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15724..16935
DNA (1212bp) protein (404aa)
Di-heme cytochrome C peroxidase; K00428 cytochrome c peroxidase [EC:1.11.1.5] rbh
UPI0003CE1AEB related cluster n=1 Tax=unknown RepID=UPI0003CE1AEB rbh
Methylamine utilization protein {ECO:0000313|EMBL:CDX58979.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
scnpilot_solids1_trim150_scaffold_9_16
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16942..18216)
DNA (1275bp) protein (425aa)
ECF subfamily RNA polymerase sigma-70 factor n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPP5_9RHIZ
ECF subfamily RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EHK57338.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ECF subfamily RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
scnpilot_solids1_trim150_scaffold_9_17
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18217..18600)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J3CHR2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKC32620.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_9_18
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18720..19196)
DNA (477bp) protein (159aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HRI4_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK56648.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
isoprenylcysteine carboxyl methyltransferase
scnpilot_solids1_trim150_scaffold_9_19
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19193..20203)
DNA (1011bp) protein (337aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HRI3_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX12790.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_9_20
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20288..21112
DNA (825bp) protein (275aa)
aldo/keto reductase (EC:1.1.1.274); K05885 2,5-diketo-D-gluconate reductase [EC:1.1.1.274]
2,5-didehydrogluconate reductase n=1 Tax=Nitratireductor indicus C115 RepID=K2NNV4_9RHIZ rbh
2,5-didehydrogluconate reductase {ECO:0000313|EMBL:EKF41060.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
scnpilot_solids1_trim150_scaffold_9_21
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21233..22432
DNA (1200bp) protein (400aa)
Major facilitator superfamily MFS_1 n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8THB0_MESCW
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADV12435.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
scnpilot_solids1_trim150_scaffold_9_22
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22401..23171)
DNA (771bp) protein (257aa)
UPI0003D02FEF related cluster n=1 Tax=unknown RepID=UPI0003D02FEF
HAD hydrolase {ECO:0000313|EMBL:ESZ30387.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
hypothetical protein; K07025 putative hydrolase of the HAD superfamily
scnpilot_solids1_trim150_scaffold_9_23
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23175..23525)
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036A608A
Putative membrane protein {ECO:0000313|EMBL:CDM60272.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
putative transmembrane protein
scnpilot_solids1_trim150_scaffold_9_24
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23752..24387
DNA (636bp) protein (212aa)
TetR family transcription regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HT91_9RHIZ rbh
TetR family transcription regulator {ECO:0000313|EMBL:EHK56032.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
TetR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_9_25
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24410..25429
DNA (1020bp) protein (340aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
ketol-acid reductoisomerase (EC:1.1.1.86); K00053 ketol-acid reductoisomerase [EC:1.1.1.86]
Ketol-acid reductoisomerase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=ILVC_RHILO
scnpilot_solids1_trim150_scaffold_9_26
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25532..25828
DNA (297bp) protein (99aa)
Nucleotidyltransferase n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8ADB0_RHIRD
Putative nucleotidyltransferase {ECO:0000313|EMBL:CDN51439.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
Nucleotidyltransferase
scnpilot_solids1_trim150_scaffold_9_27
unknown

Not on your lists

comp(25777..26016)
DNA (240bp) protein (80aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_9_28
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26286..28847
DNA (2562bp) protein (854aa)
UPI0003CE5C33 related cluster n=1 Tax=unknown RepID=UPI0003CE5C33 rbh
Dehydrogenase {ECO:0000313|EMBL:ESY70844.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
glycine cleavage T protein (aminomethyl transferase) rbh
scnpilot_solids1_trim150_scaffold_9_29
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29197..30081)
DNA (885bp) protein (295aa)
3-hydroxyisobutyrate dehydrogenase {ECO:0000256|RuleBase:RU910714}; Short=HIBADH {ECO:0000256|RuleBase:RU910714};; EC=1.1.1.31 {ECO:0000256|RuleBase:RU910714};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
3-hydroxyisobutyrate dehydrogenase; K00020 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
3-hydroxyisobutyrate dehydrogenase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSW6_9RHIZ rbh
scnpilot_solids1_trim150_scaffold_9_30
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30158..31336)
DNA (1179bp) protein (393aa)
Acyl-CoA dehydrogenase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSW5_9RHIZ
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EHK56191.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
acyl-CoA dehydrogenase
Displaying items 1-30 of 326 in total

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